RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SLC35D3Q5M8T2 416 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 DMRTA1Q5VZB9 504 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 OR13C3Q8NGS6 347 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 GRHPRQ9UBQ7 328 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 POMT1Q9Y6A1 747 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 HNF1AP20823 631 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 MPZP25189 248 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 ACAA2P42765 397 aaKnown RBP6.65□□□□□ -1.35
CPSF6-202ENST00000435070 MED25Q71SY5 747 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 OR5T1Q8NG75 326 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 IFI44Q8TCB0 444 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 SMIM12Q96EX1 92 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 NICN1Q9BSH3 213 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 TICRRQ7Z2Z1 1910 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 SFT2D2O95562 160 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 GZMBP10144 247 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 LY6G5CQ5SRR4 150 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 EXD3Q8N9H8 876 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 ASB5Q8WWX0 329 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 NINJ1Q92982 152 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 NMNAT2Q9BZQ4 307 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 BANF2Q9H503 90 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 OR1A2Q9Y585 309 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 MKI67P46013 3256 aaKnown RBP6.65□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF205O95201 554 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 CT62P0C5K7 136 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 PDGFRLQ15198 375 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF260Q3ZCT1 412 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF880Q6PDB4 577 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 RPS4Y2Q8TD47 263 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF764Q96H86 408 aaPredicted RBP6.65□□□□□ -1.35
CPSF6-202ENST00000435070 REEP6Q96HR9 211 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 FAM210BQ96KR6 192 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 EMC9Q9Y3B6 208 aa6.65□□□□□ -1.35
CPSF6-202ENST00000435070 BORCS7-ASMTA0A0B4J1R7 106 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 KLF8O95600 359 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 MBPP02686 304 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 IRF2P14316 349 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ADPRHP54922 357 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SLC35A1P78382 337 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 LBHQ53QV2 105 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 WDR74Q6RFH5 385 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ADIPOR2Q86V24 386 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 BORCS7Q96B45 105 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SCARF2Q96GP6 870 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 CASD1Q96PB1 797 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 RAB11FIP5Q9BXF6 653 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 UBTD1Q9HAC8 227 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 LIPGQ9Y5X9 500 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 MTCL1Q9Y4B5 1905 aaKnown RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 MPIG6BO95866 241 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 RPL7P18124 248 aaKnown RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 LBX1P52954 281 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SUPT4H1P63272 117 aaKnown RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SP6Q3SY56 376 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ARL6IP6Q8N6S5 226 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SCRT1Q9BWW7 348 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 DUSP15Q9H1R2 295 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 CNTD2Q9H8S5 307 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 MMP9P14780 707 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 OMGP23515 440 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SRYQ05066 204 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 VAMP3Q15836 100 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 PRSS41Q7RTY9 318 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 CDC20BQ86Y33 519 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ZFP62Q8NB50 900 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 TMEM208Q9BTX3 173 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 MENTQ9BUN1 341 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SLC25A31Q9H0C2 315 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 RAB18Q9NP72 206 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 CSTAP01040 98 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 DMWDQ09019 674 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 RUNX2Q13950 521 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 RNF144BQ7Z419 303 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF429Q86V71 674 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF709Q8N972 641 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 POC1AQ8NBT0 407 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 PRRX2Q99811 253 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 IL21Q9HBE4 155 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 C19orf25Q9UFG5 118 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 TET1Q8NFU7 2136 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 A0A1W2PP11 408 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 P2RY10O00398 339 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 TAAR5O14804 337 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ARPC3O15145 178 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 HOXB2P14652 356 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 RBMXP38159 391 aaKnown RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 EMP2P54851 167 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SCAND1P57086 179 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 TAS2R31P59538 309 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 SELENOVP59797 346 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ZP2Q05996 745 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 MORN1Q5T089 497 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 CNKSR3Q6P9H4 555 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 ANKRD33Q7Z3H0 272 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 GRASPQ7Z6J2 395 aaPredicted RBP6.64□□□□□ -1.35
CPSF6-202ENST00000435070 GPR137CQ8N3F9 429 aa6.64□□□□□ -1.35
CPSF6-202ENST00000435070 CYB561D1Q8N8Q1 229 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms