RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 ATXN7L1Q9ULK2 861 aaPredicted RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 ADAMTS9Q9P2N4 1935 aa9.96□□□□□ -0.81
USP4-205ENST00000431357 AQP7P3A6NL99 342 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 FIGNL2A6NMB9 653 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 CYC1P08574 325 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 ZNF17P17021 662 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 CDAP32320 146 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 ECI1P42126 302 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 GUCA1AP43080 201 aaPredicted RBP9.96□□□□□ -0.82
USP4-205ENST00000431357 NPY4RP50391 375 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 AFF3P51826 1226 aaKnown RBP9.96□□□□□ -0.82
USP4-205ENST00000431357 FOXL2P58012 376 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 SLC35A1P78382 337 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 MFAP5Q13361 173 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 SWI5Q1ZZU3 235 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 NKAPLQ5M9Q1 402 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 IL34Q6ZMJ4 242 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 FAM57BQ71RH2 274 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 DNASE2BQ8WZ79 361 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 C2orf50Q96LR7 162 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 AQP10Q96PS8 301 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 SPACA5Q96QH8 159 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 TCEAL7Q9BRU2 100 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 ZNF319Q9P2F9 582 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 ZNF629Q9UEG4 869 aaPredicted RBP9.96□□□□□ -0.82
USP4-205ENST00000431357 OSGIN2Q9Y236 505 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 MEMO1Q9Y316 297 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 MTCH2Q9Y6C9 303 aa9.96□□□□□ -0.82
USP4-205ENST00000431357 TAAR5O14804 337 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 RER1O15258 196 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 BCAT2O15382 392 aaPredicted RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 RAD51DO75771 328 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 PLATP00750 562 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 IGLV3-1P01715 115 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 SLC2A1P11166 492 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 PNLIPP16233 465 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 C10orf91Q5T1B1 145 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 CARD17Q5XLA6 110 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 ALKBH2Q6NS38 261 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 RAB11FIP2Q7L804 512 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 RNF144BQ7Z419 303 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 ZSCAN4Q8NAM6 433 aaPredicted RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 OR10G3Q8NGC4 313 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 OR51T1Q8NGJ9 327 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 EMG1Q92979 244 aaKnown RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 PGAM5Q96HS1 289 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 TMEM68Q96MH6 324 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 CNTNAP3BQ96NU0 1288 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 NECAB3Q96P71 396 aaPredicted RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 RTBDNQ9BSG5 229 aaPredicted RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 PHF7Q9BWX1 381 aaPredicted RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 MMP26Q9NRE1 261 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 CA14Q9ULX7 337 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 CBY1Q9Y3M2 126 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 FER1L5A0AVI2 2057 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 REV3LO60673 3130 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 A0A1W2PNR3 127 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 FAM74A7A6NL05 159 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 FOXI3A8MTJ6 420 aaPredicted RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 SERPINE3A8MV23 424 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 H0YIZ8 118 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 SGCEO43556 437 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 SCRG1O75711 98 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 PTGFRP43088 359 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 SLC9A3R2Q15599 337 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 FAM74A3Q4VXF1 159 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 EIF5AL1Q6IS14 154 aaKnown RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 RTN4RL2Q86UN3 420 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 FADS6Q8N9I5 356 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 SLC38A9Q8NBW4 561 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 OR13G1Q8NGZ3 307 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 PAQR8Q8TEZ7 354 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 PP6455Q8WZ26 134 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 C10orf35Q96D05 121 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 SAT2Q96F10 170 aaPredicted RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 SOX7Q9BT81 388 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 TM2D1Q9BX74 207 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 SLC26A1Q9H2B4 701 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 ESRP2Q9H6T0 727 aaKnown RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 METTL8Q9H825 291 aaKnown RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 UFSP2Q9NUQ7 469 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 RARRES3Q9UL19 164 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 CARHSP1Q9Y2V2 147 aaKnown RBP9.95□□□□□ -0.82
USP4-205ENST00000431357 ADAMTS20P59510 1910 aa9.95□□□□□ -0.82
USP4-205ENST00000431357 A0A087WZY1 265 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 IGKV1-9A0A0C4DH69 117 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 A0A0U1RQV5 110 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 TP53I11O14683 189 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 MBTPS2O43462 519 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 NDUFS6O75380 124 aaKnown RBP9.94□□□□□ -0.82
USP4-205ENST00000431357 OR2J2O76002 312 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 MYF5P13349 255 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 DHPSP49366 369 aaPredicted RBP9.94□□□□□ -0.82
USP4-205ENST00000431357 NUBP1P53384 320 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 SNU13P55769 128 aaKnown RBP9.94□□□□□ -0.82
USP4-205ENST00000431357 SUPT4H1P63272 117 aaKnown RBP9.94□□□□□ -0.82
USP4-205ENST00000431357 CSNK2A1P68400 391 aaPredicted RBP9.94□□□□□ -0.82
USP4-205ENST00000431357 KISS1Q15726 138 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 AADACL3Q5VUY0 350 aa9.94□□□□□ -0.82
USP4-205ENST00000431357 ZNF585AQ6P3V2 769 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms