RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 SEC13P55735 322 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 RND3P61587 244 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 EIF2B1Q14232 305 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 PSG3Q16557 428 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 PRSS53Q2L4Q9 553 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 TCTN1Q2MV58 587 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 PHF19Q5T6S3 580 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 PRR27Q6MZM9 219 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 EXD3Q8N9H8 876 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR6K2Q8NGY2 324 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR4S2Q8NH73 311 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF417Q8TAU3 575 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ASB11Q8WXH4 323 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 SDSLQ96GA7 329 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ARHGDIGQ99819 225 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 TPSD1Q9BZJ3 242 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 FUT9Q9Y231 359 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 A0A1W2PS29 197 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 RIIAD1A6NNX1 92 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 K7N7A8 449 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 LEFTY2O00292 366 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 CDC42EP2O14613 210 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 RCBTB2O95199 551 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF16P17020 682 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF28P17035 718 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 TNFSF4P23510 183 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 HOXD9P28356 352 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 PPP1CCP36873 323 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 PBX2P40425 430 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 BUD31P41223 144 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 P2RY1P47900 373 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 RAB28P51157 221 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 UBE2NP61088 152 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 NSDHLQ15738 373 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 CTXN3Q4LDR2 81 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF506Q5JVG8 444 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 TPTE2P1Q5T6R2 138 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF584Q8IVC4 421 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 FAM219AQ8IW50 185 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 CRIPAKQ8N1N5 446 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ADAD2Q8NCV1 583 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR51D1Q8NGF3 324 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 BCL2L2Q92843 193 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 AIF1LQ9BQI0 150 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 TMEM106BQ9NUM4 274 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 ICAM5Q9UMF0 924 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 WSB1Q9Y6I7 421 aa7.88□□□□□ -1.15
CDC42BPA-206ENST00000429440 TRBV5-4A0A0C4DH59 114 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 TRBV5-5A0A0J9YX44 114 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 A0A1B0GV72 72 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 CDC14CA4D256 554 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 VSTM2BA6NLU5 285 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 FGF17O60258 216 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 TBX19O60806 448 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 ONECUT2O95948 504 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 CD160O95971 181 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 C8AP07357 584 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 APOBEC1P41238 236 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 ACAA2P42765 397 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 LSSP48449 732 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF41P51814 821 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 PRRX1P54821 245 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 TAS2R50P59544 299 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 RBPJQ06330 500 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 GGTLC2Q14390 218 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 RFLNBQ8N5W9 214 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 CYB561D1Q8N8Q1 229 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR4B1Q8NGF8 309 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR14C36Q8NHC7 312 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 FGF13Q92913 245 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 CMKLR1Q99788 373 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 ABHD14AQ9BUJ0 271 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 MRPL27Q9P0M9 148 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 TAAR2Q9P1P5 351 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 KIF26AQ9ULI4 1882 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 SCN5AQ14524 2016 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 A0A0D9SEW6 157 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF320A2RRD8 509 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 H3BNC9 293 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 PFN1P07737 140 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 MPC1LP0DKB6 136 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF708P17019 499 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 RGRP47804 291 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 SPEM2Q0P670 501 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 C2orf76Q3KRA6 126 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 TDRG1Q3Y452 100 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 TOMM20LQ6UXN7 152 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 S100A7AQ86SG5 101 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR4D6Q8NGJ1 314 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 RNF128Q8TEB7 428 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 TMEM239Q8WW34 195 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 PINX1Q96BK5 328 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 RSPRY1Q96DX4 576 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 SMIM14Q96QK8 99 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 GABRG3Q99928 467 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 HIPK2Q9H2X6 1198 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 TM7SF3Q9NS93 570 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 FLRT3Q9NZU0 649 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 UQCR10Q9UDW1 63 aa7.87□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC7A7Q9UM01 511 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms