RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 IGHV3OR15-7A0A075B7D8 119 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 IGHV3OR16-10A0A075B7F0 116 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 TMEM269A0A1B0GVZ9 245 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 SAC3D1A6NKF1 404 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 ZNF850A8MQ14 1090 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 ZNF670-ZNF695F2Z2N8 137 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 NDUFA2O43678 99 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 ENSAO43768 121 aaKnown RBP10.57□□□□□ -0.72
SGCE-203ENST00000425444 ACKR3P25106 362 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 EPHA2P29317 976 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 PSMB10P40306 273 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 NPY4RP50391 375 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 PAX8Q06710 450 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 NXNL2Q5VZ03 156 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 C12orf73Q69YU5 71 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 DEGS2Q6QHC5 323 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 WDR86Q86TI4 376 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 ZDHHC23Q8IYP9 409 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 ZNF679Q8IYX0 411 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 SIGLECL1Q8N7X8 197 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 PYDC1Q8WXC3 89 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 PIGCQ92535 297 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 ITPKCQ96DU7 683 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 CENPNQ96H22 339 aaPredicted RBP10.57□□□□□ -0.72
SGCE-203ENST00000425444 LYZL4Q96KX0 146 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 HIST1H2AAQ96QV6 131 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 OR8B4Q96RC9 309 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 MS4A7Q9GZW8 240 aaPredicted RBP10.57□□□□□ -0.72
SGCE-203ENST00000425444 MMP27Q9H306 513 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 PPP1R3EQ9H7J1 279 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 RNPEPL1Q9HAU8 725 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 MPC1Q9Y5U8 109 aa10.57□□□□□ -0.72
SGCE-203ENST00000425444 TRAV40A0A0B4J280 105 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 ACOD1A6NK06 481 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 ZNF254O75437 659 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 MAP2K3P46734 347 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 GMFBP60983 142 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 CXCR4P61073 352 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 ACTR3P61158 418 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 PAX2Q02962 417 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 POU4F2Q12837 409 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 MICBQ29980 383 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 KLF17Q5JT82 389 aaPredicted RBP10.56□□□□□ -0.72
SGCE-203ENST00000425444 AADACL4Q5VUY2 407 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 CD276Q5ZPR3 534 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 ZNF322Q6U7Q0 402 aaPredicted RBP10.56□□□□□ -0.72
SGCE-203ENST00000425444 WDR82Q6UXN9 313 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 ASRGL1Q7L266 308 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 THAP5Q7Z6K1 395 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 GALNT4Q8N4A0 578 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 OR51G2Q8NGK0 314 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 TAF15Q92804 592 aaKnown RBP eCLIP10.56□□□□□ -0.72
SGCE-203ENST00000425444 FAM71F1Q96KD3 344 aaPredicted RBP10.56□□□□□ -0.72
SGCE-203ENST00000425444 MNTQ99583 582 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 RBM4BQ9BQ04 359 aaKnown RBP10.56□□□□□ -0.72
SGCE-203ENST00000425444 PBOV1Q9GZY1 135 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 FAM206AQ9NX38 181 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 CTSZQ9UBR2 303 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 ZNF69Q9UC07 566 aa10.56□□□□□ -0.72
SGCE-203ENST00000425444 COL7A1Q02388 2944 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 A0A0U1RQV5 110 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 ZNF816-ZNF321PA0A0X1KG74 233 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 KIR2DS1A0A191URI9 304 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 DNAJC9-AS1A6NH13 148 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 TMEM210A6NLX4 147 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 PRR32B1ATL7 298 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 C22orf46C9J442 243 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 LOC110117498-PIK3R3F6TDL0 507 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 CDIPTO14735 213 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 CST4P01036 141 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 IGHV4-38-2P0DP08 117 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 MDKP21741 143 aaPredicted RBP10.55□□□□□ -0.72
SGCE-203ENST00000425444 DCTDP32321 178 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 ROM1Q03395 351 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 SRSF4Q08170 494 aaKnown RBP10.55□□□□□ -0.72
SGCE-203ENST00000425444 TEX36Q5VZQ5 186 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 ZNF841Q6ZN19 808 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 FAM90A1Q86YD7 464 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 OR51E1Q8TCB6 317 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 OR5P3Q8WZ94 311 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 ST8SIA4Q92187 359 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 DACT3Q96B18 629 aaPredicted RBP10.55□□□□□ -0.72
SGCE-203ENST00000425444 RNF170Q96K19 258 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 GABARAPL3Q9BY60 117 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 MOB1AQ9H8S9 216 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 ADGRL4Q9HBW9 690 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 SMURF1Q9HCE7 757 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 GPR84Q9NQS5 396 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 CLN6Q9NWW5 311 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 DNAJB11Q9UBS4 358 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 NUFIP1Q9UHK0 495 aaKnown RBP10.55□□□□□ -0.72
SGCE-203ENST00000425444 ORC6Q9Y5N6 252 aa10.55□□□□□ -0.72
SGCE-203ENST00000425444 SRRM5B3KS81 715 aa10.54□□□□□ -0.72
SGCE-203ENST00000425444 M0QZ24 198 aa10.54□□□□□ -0.72
SGCE-203ENST00000425444 LHBP01229 141 aa10.54□□□□□ -0.72
SGCE-203ENST00000425444 PPIAL4GP0DN37 164 aa10.54□□□□□ -0.72
SGCE-203ENST00000425444 MUC1P15941 1255 aaPredicted RBP10.54□□□□□ -0.72
SGCE-203ENST00000425444 ATP6V1E1P36543 226 aa10.54□□□□□ -0.72
SGCE-203ENST00000425444 POLR2IP36954 125 aaKnown RBP10.54□□□□□ -0.72
SGCE-203ENST00000425444 CDC42P60953 191 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms