RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ZNF69Q9UC07 566 aa13□□□□□ -0.33
ITGB1-204ENST00000417122 ZNF816-ZNF321PA0A0X1KG74 233 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 TMEM210A6NLX4 147 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 C22orf46C9J442 243 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 ZNF670-ZNF695F2Z2N8 137 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 ENSAO43768 121 aaKnown RBP12.99□□□□□ -0.33
ITGB1-204ENST00000417122 MUC1P15941 1255 aaPredicted RBP12.99□□□□□ -0.33
ITGB1-204ENST00000417122 POU4F2Q12837 409 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 KPNB1Q14974 876 aaKnown RBP12.99□□□□□ -0.33
ITGB1-204ENST00000417122 MICBQ29980 383 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 CD276Q5ZPR3 534 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 KCTD8Q6ZWB6 473 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 COMMD2Q86X83 199 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 OR51G2Q8NGK0 314 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 OR51E1Q8TCB6 317 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 HPSE2Q8WWQ2 592 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 ITFG2Q969R8 447 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 UPRTQ96BW1 309 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 RNF170Q96K19 258 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 HIST1H2AAQ96QV6 131 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 APOL4Q9BPW4 351 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 RASSF4Q9H2L5 321 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 CLN6Q9NWW5 311 aa12.99□□□□□ -0.33
ITGB1-204ENST00000417122 NUFIP1Q9UHK0 495 aaKnown RBP12.99□□□□□ -0.33
ITGB1-204ENST00000417122 TMPRSS2O15393 492 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 MAGEB4O15481 346 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 SRSF10O75494 262 aaKnown RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 IGLV3-1P01715 115 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 IGHV4-38-2P0DP08 117 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 ATP6V1B1P15313 513 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 CFHR2P36980 270 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 MFGE8Q08431 387 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 TUSC1Q2TAM9 212 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 FAM76BQ5HYJ3 339 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 RBMS3Q6XE24 437 aaKnown RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 KRT74Q7RTS7 529 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 BCL6BQ8N143 479 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 SIGLECL1Q8N7X8 197 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 ZDHHC22Q8N966 263 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 FAM216AQ8WUB2 273 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 RPL3LQ92901 407 aaKnown RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 PPP1R14AQ96A00 147 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 FAM71F1Q96KD3 344 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 FGF23Q9GZV9 251 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 MS4A7Q9GZW8 240 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 SMURF1Q9HCE7 757 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 ESM1Q9NQ30 184 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 GPR84Q9NQS5 396 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 KAAG1Q9UBP8 84 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 WARS2Q9UGM6 360 aaKnown RBP12.98□□□□□ -0.33
ITGB1-204ENST00000417122 GTF2A1LQ9UNN4 478 aa12.98□□□□□ -0.33
ITGB1-204ENST00000417122 IGHV3OR16-10A0A075B7F0 116 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 TRAV40A0A0B4J280 105 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 SRRM5B3KS81 715 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 LOC110117498-PIK3R3F6TDL0 507 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 H3BNX3 289 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.97□□□□□ -0.33
ITGB1-204ENST00000417122 TTRP02766 147 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 HTR1FP30939 366 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 FGF12P61328 243 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 ACTG1P63261 375 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 EGR3Q06889 387 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 RIPPLY1Q0D2K3 151 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 ZFP1Q6P2D0 407 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 PLEKHG7Q6ZR37 379 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 THAP5Q7Z6K1 395 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 SCCPDHQ8NBX0 429 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 OR8J1Q8NGP2 316 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 OR10Z1Q8NGY1 313 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 SEH1LQ96EE3 360 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 TBX5Q99593 518 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 MOB1AQ9H8S9 216 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 MRM2Q9UI43 246 aaKnown RBP12.97□□□□□ -0.33
ITGB1-204ENST00000417122 R4GMQ9 66 aa12.97□□□□□ -0.33
ITGB1-204ENST00000417122 DVL1O14640 695 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 MTRF1O75570 445 aaKnown RBP12.96□□□□□ -0.33
ITGB1-204ENST00000417122 FCN3O75636 299 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 PLATP00750 562 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 LIPFP07098 398 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 GPM6AP51674 278 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 CDC42P60953 191 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 UBA52P62987 128 aaKnown RBP12.96□□□□□ -0.33
ITGB1-204ENST00000417122 ELF3P78545 371 aaPredicted RBP12.96□□□□□ -0.33
ITGB1-204ENST00000417122 CEACAM21Q3KPI0 293 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 WDR38Q5JTN6 314 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 CEP78Q5JTW2 689 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 BCL2L15Q5TBC7 163 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 ZBTB37Q5TC79 503 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 DOK3Q7L591 496 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 SSX6Q7RTT6 188 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 PNLDC1Q8NA58 520 aaKnown RBP12.96□□□□□ -0.33
ITGB1-204ENST00000417122 C12orf43Q96C57 262 aaKnown RBP12.96□□□□□ -0.33
ITGB1-204ENST00000417122 ZNF48Q96MX3 618 aaPredicted RBP12.96□□□□□ -0.33
ITGB1-204ENST00000417122 CCL13Q99616 98 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 ENPP5Q9UJA9 477 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 OR52A1Q9UKL2 312 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 PIGLQ9Y2B2 252 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 ORC6Q9Y5N6 252 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 SNX5Q9Y5X3 404 aa12.96□□□□□ -0.33
ITGB1-204ENST00000417122 A0A1B0GW55 424 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms