RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ETV1P50549 477 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 CCR9P51686 369 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 CSNK2BP67870 215 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 RIPPLY1Q0D2K3 151 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 TMEM155Q4W5P6 130 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 FAM76BQ5HYJ3 339 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 ZNF826PQ6ZT77 177 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 ZNF771Q7L3S4 317 aaPredicted RBP11.05□□□□□ -0.64
HDAC8-210ENST00000412342 DOK3Q7L591 496 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 THAP5Q7Z6K1 395 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 LRRC28Q86X40 367 aaPredicted RBP11.05□□□□□ -0.64
HDAC8-210ENST00000412342 COMMD2Q86X83 199 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 ZDHHC23Q8IYP9 409 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 GCSAMQ8N6F7 178 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 OR8S1Q8NH09 359 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 PIGCQ92535 297 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 GGHQ92820 318 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 ZNF665Q9H7R5 613 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 FN3KRPQ9HA64 309 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 TMEM165Q9HC07 324 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 ABCB9Q9NP78 766 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 FKBP14Q9NWM8 211 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 C14orf119Q9NWQ9 140 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 ENPP5Q9UJA9 477 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 DIMT1Q9UNQ2 313 aaKnown RBP11.05□□□□□ -0.64
HDAC8-210ENST00000412342 PIGLQ9Y2B2 252 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 SVEP1Q4LDE5 3571 aa11.05□□□□□ -0.64
HDAC8-210ENST00000412342 LOC107986453A0A1B0GWG9 222 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 LRRC30A6NM36 301 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 ANXA2P2A6NMY6 339 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 INAFM1C9JVW0 142 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 F5H0A9 414 aaPredicted RBP11.04□□□□□ -0.64
HDAC8-210ENST00000412342 XPNPEP2O43895 674 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 LMX1BO60663 402 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 MTRF1O75570 445 aaKnown RBP11.04□□□□□ -0.64
HDAC8-210ENST00000412342 ZNF205O95201 554 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 LHBP01229 141 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 ISG15P05161 165 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 GRPP07492 148 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 HTR1AP08908 422 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 UBCP0CG48 685 aaKnown RBP11.04□□□□□ -0.64
HDAC8-210ENST00000412342 EGR1P18146 543 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 MDH2P40926 338 aaKnown RBP11.04□□□□□ -0.64
HDAC8-210ENST00000412342 MZT1Q08AG7 82 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 ODF4Q2M2E3 257 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 IZUMO2Q6UXV1 221 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 PEG10Q86TG7 708 aaKnown RBP11.04□□□□□ -0.64
HDAC8-210ENST00000412342 RDH10Q8IZV5 341 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 LINC01356Q8N9X3 169 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 ZNF485Q8NCK3 441 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 RPS4Y2Q8TD47 263 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 MICU1Q9BPX6 476 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 C1orf123Q9NWV4 160 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 CNOT2Q9NZN8 540 aaKnown RBP11.04□□□□□ -0.64
HDAC8-210ENST00000412342 RNF7Q9UBF6 113 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 PSORS1C1Q9UIG5 152 aa11.04□□□□□ -0.64
HDAC8-210ENST00000412342 PPIAL4EA0A075B759 164 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 A0A1B0GVI7 797 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 IRGMA1A4Y4 181 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 ISPDA4D126 451 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 TMEM210A6NLX4 147 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 CEACAM18A8MTB9 384 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 A8MV72 311 aaPredicted RBP11.03□□□□□ -0.64
HDAC8-210ENST00000412342 PPIAL4DF5H284 164 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 H3BSH0 61 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.03□□□□□ -0.64
HDAC8-210ENST00000412342 SYT7O43581 403 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 PPIAL4FP0DN26 164 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 MYF6P23409 242 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 TGM4P49221 684 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 ALKBH1Q13686 389 aaKnown RBP11.03□□□□□ -0.64
HDAC8-210ENST00000412342 CEACAM21Q3KPI0 293 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 ZNF404Q494X3 552 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 DMRTC1Q5HYR2 192 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 CEP78Q5JTW2 689 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 OR2G6Q5TZ20 316 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 XAF1Q6GPH4 301 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 C1orf87Q8N0U7 546 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 CCDC54Q8NEL0 328 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 OR11L1Q8NGX0 322 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 OR10AC1Q8NH08 325 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 MRPL48Q96GC5 212 aaKnown RBP11.03□□□□□ -0.64
HDAC8-210ENST00000412342 TMEM80Q96HE8 168 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 GAL3ST1Q99999 423 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 TMEM246Q9BRR3 403 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 RTL8AQ9BWD3 113 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 ANKRD60Q9BZ19 345 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 VCX3BQ9H321 246 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 METTL17Q9H7H0 456 aaPredicted RBP11.03□□□□□ -0.64
HDAC8-210ENST00000412342 PATZ1Q9HBE1 687 aaKnown RBP11.03□□□□□ -0.64
HDAC8-210ENST00000412342 YAE1D1Q9NRH1 226 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 CLEC2DQ9UHP7 191 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 RRP15Q9Y3B9 282 aaKnown RBP11.03□□□□□ -0.64
HDAC8-210ENST00000412342 PPIAL4AQ9Y536 164 aa11.03□□□□□ -0.64
HDAC8-210ENST00000412342 NIPBLQ6KC79 2804 aaeCLIP11.02□□□□□ -0.65
HDAC8-210ENST00000412342 A6NIN4 97 aa11.02□□□□□ -0.65
HDAC8-210ENST00000412342 OR5B21A6NL26 309 aa11.02□□□□□ -0.65
HDAC8-210ENST00000412342 A6NLC8 198 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms