RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 C5orf34Q96MH7 638 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 GPX7Q96SL4 187 aaPredicted RBP11.34□□□□□ -0.59
HERC3-203ENST00000407637 TPSD1Q9BZJ3 242 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 OR8D2Q9GZM6 311 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 C19orf53Q9UNZ5 99 aaPredicted RBP11.34□□□□□ -0.59
HERC3-203ENST00000407637 SRPK3Q9UPE1 567 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 POLR3KQ9Y2Y1 108 aaPredicted RBP11.34□□□□□ -0.59
HERC3-203ENST00000407637 WSB1Q9Y6I7 421 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 KIR2DL5BA0A0G2JN68 375 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 KIR2DL5BA0A0G2JPC4 375 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 A6NIZ1 184 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 M0QZK8 103 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 SDCBPO00560 298 aaPredicted RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 SIAH2O43255 324 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 GGCTO75223 188 aaKnown RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 HLA-DQA2P01906 255 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 CST2P09228 141 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 SLC35G6P0C7Q6 338 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 RAP1BP61224 184 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 SP3Q02447 781 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 MAP2K5Q13163 448 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 PMS2P11Q13670 270 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 ALG10Q5BKT4 473 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 FHL5Q5TD97 284 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 SLC35E3Q7Z769 313 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 NRSN1Q8IZ57 195 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 KIR2DL5AQ8N109 375 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 OR2L8Q8NGY9 312 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 TAAR8Q969N4 342 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 URM1Q9BTM9 101 aaKnown RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 DKKL1Q9UK85 242 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 ZNF860A6NHJ4 632 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 HSPA12AO43301 675 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 CDC14BO60729 498 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 CRTAPO75718 401 aaPredicted RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 APODP05090 189 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 FGF5P12034 268 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 RBMXP38159 391 aaKnown RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 ASCL1P50553 236 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 MMP16P51512 607 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 HLA-DRB3P79483 266 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 TMEM176BQ3YBM2 270 aaPredicted RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 VAX1Q5SQQ9 334 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 MARCH3Q86UD3 253 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 SGPP2Q8IWX5 399 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 ZFP62Q8NB50 900 aaPredicted RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 MRPL24Q96A35 216 aaKnown RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 ZNF514Q96K75 400 aaPredicted RBP11.33□□□□□ -0.6
HERC3-203ENST00000407637 ZNF700Q9H0M5 742 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 TMEM74BQ9NUR3 256 aa11.33□□□□□ -0.6
HERC3-203ENST00000407637 HSPB2A8KAH6 182 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 NSA2O95478 260 aaKnown RBP11.32□□□□□ -0.6
HERC3-203ENST00000407637 VSIG8P0DPA2 414 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 CPMP14384 443 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 RND2P52198 227 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 HSPB2Q16082 182 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 BATFQ16520 125 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 FBXO46Q6PJ61 603 aaPredicted RBP11.32□□□□□ -0.6
HERC3-203ENST00000407637 CDRT4Q8N9R6 151 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 OR5H2Q8NGV7 314 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 SMARCD2Q92925 531 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 MRGPRX4Q96LA9 322 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 WFIKKN1Q96NZ8 548 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 HIST1H2AAQ96QV6 131 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 GPR173Q9NS66 373 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 C1orf123Q9NWV4 160 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 TUBD1Q9UJT1 453 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 GAB2Q9UQC2 676 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 LOC107986453A0A1B0GWG9 222 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 MEGF11A6BM72 1044 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 K7EQS6 105 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 SPINT1O43278 529 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 AHSA1O95433 338 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 SCGB1D1O95968 90 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 ZNF888P0CJ79 500 aaPredicted RBP11.32□□□□□ -0.6
HERC3-203ENST00000407637 BRS3P32247 399 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 ELLP55199 621 aaPredicted RBP11.32□□□□□ -0.6
HERC3-203ENST00000407637 OR5I1Q13606 314 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 FBXW9Q5XUX1 488 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 COX15Q7KZN9 410 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 KREMEN2Q8NCW0 462 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 C22orf15Q8WYQ4 148 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 TSPAN32Q96QS1 320 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 CABLES2Q9BTV7 478 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 GRHPRQ9UBQ7 328 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 TCFL5Q9UL49 500 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 DNAH14Q0VDD8 3507 aa11.32□□□□□ -0.6
HERC3-203ENST00000407637 IGKV1D-42A0A075B6H8 117 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 CCL15-CCL14A0A0B4J2E2 113 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 E5RGE8 158 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 CLDN34H7C241 214 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 SCGNO76038 276 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 DIRAS3O95661 229 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 GRK6P43250 576 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 CCR4P51679 360 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 POLR2HP52434 150 aaKnown RBP11.31□□□□□ -0.6
HERC3-203ENST00000407637 FOXF1Q12946 379 aa11.31□□□□□ -0.6
HERC3-203ENST00000407637 FZD2Q14332 565 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms