RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 METTL15P1P0C7V9 234 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZNF17P17021 662 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 FPR3P25089 353 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ATP5A1P25705 553 aaKnown RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RPS19P39019 145 aaKnown RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 APOBEC1P41238 236 aaKnown RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 KIR2DS4P43632 304 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 KLF3P57682 345 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RPL31P62899 125 aaKnown RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 PAFAH1B2P68402 229 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 NTHL1P78549 312 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CD300CQ08708 224 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CD47Q08722 323 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RIPPLY1Q0D2K3 151 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 KLF5Q13887 457 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 KIAA0141Q14154 515 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 DOC2BQ14184 412 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZNF169Q14929 603 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ABRAXAS2Q15018 415 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 TEAD2Q15562 447 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 C3AR1Q16581 482 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CEACAM21Q3KPI0 293 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 TTLL9Q3SXZ7 439 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZNF672Q499Z4 452 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CLLU1OSQ5K130 101 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ANKRD34AQ69YU3 496 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 GAGE2AQ6NT46 116 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 SHC4Q6S5L8 630 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 PLET1Q6UQ28 207 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 SCIMPQ6UWF3 145 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 PARM1Q6UWI2 310 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RAD9BQ6WBX8 426 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 DCDC5Q6ZRR9 648 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ISCA2Q86U28 154 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RAB43Q86YS6 212 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZDHHC13Q8IUH4 622 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 SLC30A8Q8IWU4 369 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CPNE9Q8IYJ1 553 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CMTM4Q8IZR5 234 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZNF843Q8N446 348 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 D2HGDHQ8N465 521 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ARRDC1Q8N5I2 433 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ARIH2OSQ8N7S6 290 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 AQP11Q8NBQ7 271 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 OR5H6Q8NGV6 325 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 SKA2Q8WVK7 121 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 C1orf54Q8WWF1 131 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RGP1Q92546 391 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 GHSRQ92847 366 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 FKBP10Q96AY3 582 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZNF486Q96H40 463 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 DUX3Q96PT4 197 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RBP7Q96R05 134 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 OR1A1Q9P1Q5 309 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RCC2Q9P258 522 aaKnown RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 AMDHD2Q9Y303 409 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 AK6Q9Y3D8 172 aaKnown RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 AHCTF1Q8WYP5 2266 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 COL5A1P20908 1838 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 KIAA1549LQ6ZVL6 1849 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 A0A096LPK6 155 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RPS10-NUDT3A0A1W2PQS6 291 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 DHRS7CA6NNS2 312 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZNF732B4DXR9 585 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 E7ENX8 843 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CDX4O14627 284 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CHST10O43529 356 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 NUDT3O95989 172 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 HAND1O96004 215 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 C1QCP02747 245 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CATP04040 527 aaKnown RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CTSLP07711 333 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 UNGP13051 313 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 GABRA1P14867 456 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 SFTPDP35247 375 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 IFNGR2P38484 337 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 RFC3P40938 356 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CDKN2DP55273 166 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 TCTAP57738 103 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 EMX2Q04743 252 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CDSNQ15517 529 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZNF630Q2M218 657 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 GPRC6AQ5T6X5 926 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ZNF782Q6ZMW2 699 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ASRGL1Q7L266 308 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 ATG4DQ86TL0 474 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 CATSPER3Q86XQ3 398 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 LRRC25Q8N386 305 aaPredicted RBP3.39□□□□□ -1.87
CLHC1-201ENST00000401408 IQCF1Q8N6M8 205 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 TPRX1Q8N7U7 411 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 C4orf32Q8N8J7 132 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 OR11H4Q8NGC9 324 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 OR6T1Q8NGN1 323 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 OR5K2Q8NHB8 316 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 HAVCR2Q8TDQ0 301 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 GATAD1Q8WUU5 269 aa3.39□□□□□ -1.87
CLHC1-201ENST00000401408 TFB1MQ8WVM0 346 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms