RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 FAM122BQ7Z309 247 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 REC114Q7Z4M0 266 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 BIVMQ86UB2 503 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 BORCS8Q96FH0 119 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF416Q9BWM5 594 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OR10A2Q9H208 303 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 WASF3Q9UPY6 502 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 STRAPQ9Y3F4 350 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 WNK2Q9Y3S1 2297 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 MS4A18H0YCH9 400 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ABHD16AO95870 558 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GLP1RP43220 463 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GPR85P60893 370 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 MS4A18Q3C1V0 323 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 BPIFCQ8NFQ6 507 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF75AQ96N20 296 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 NPDC1Q9NQX5 325 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 NXT1Q9UKK6 140 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 KCNS2Q9ULS6 477 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 CSAG2Q9Y5P2 127 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 A0A1W2PP11 408 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 D6RAR5 112 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 UBE2L6O14933 153 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 CIDEAO60543 219 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 PIAS2O75928 621 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 RPLP1P05386 114 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 PRF1P14222 555 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OTX2P32243 289 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OR3A4PP47883 348 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF84P51523 738 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 SMAD4Q13485 552 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 SLC22A6Q4U2R8 563 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 RNF144BQ7Z419 303 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 PPP1R3BQ86XI6 285 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OR1S2Q8NGQ3 325 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 TMED6Q8WW62 240 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ADAT3Q96EY9 351 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 HIST1H2AAQ96QV6 131 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ULBP2Q9BZM5 246 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 G6PC2Q9NQR9 355 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GPR84Q9NQS5 396 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ABI3Q9P2A4 366 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ASH2LQ9UBL3 628 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 YTHDF2Q9Y5A9 579 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 TCF20Q9UGU0 1960 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 MDFIC2A0A1B0GVS7 189 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 H3BMH7 237 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 SFT2D2O95562 160 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GALNSP34059 522 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 NOXO1Q8NFA2 376 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 HOXB13Q92826 284 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 SCGB3A2Q96PL1 93 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF275Q9NSD4 429 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GLS2Q9UI32 602 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 VSIG4Q9Y279 399 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 DHHO43323 396 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 BCL2L11O43521 198 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 DXOO77932 396 aaKnown RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 HRH1P35367 487 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 CXCL12P48061 93 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 LYSMD4Q5XG99 296 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 PTCRAQ6ISU1 281 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 C11orf87Q6NUJ2 197 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 C20orf196Q8IYI0 205 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 STPG2Q8N412 459 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 OR5T1Q8NG75 326 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 LRRC37A2A6NM11 1700 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 RER1O15258 196 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 CXCL13O43927 109 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 EMP1P54849 157 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 DCDP81605 110 aaKnown RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 H3F3CQ6NXT2 135 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 C5orf46Q6UWT4 87 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 GPR137CQ8N3F9 429 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 PLPP5Q8NEB5 264 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 TMEM59Q9BXS4 323 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 NPTNQ9Y639 398 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 CEP290O15078 2479 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 CDK2AP1O14519 115 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 IFNA2P01563 188 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 GLI4P10075 376 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 NME1P15531 152 aaKnown RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 PNLIPP16233 465 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 GDF1P27539 372 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 FOXK1P85037 733 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 TUSC1Q2TAM9 212 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 DOK3Q7L591 496 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 YRDCQ86U90 279 aaKnown RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF519Q8TB69 540 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 UQCC2Q9BRT2 126 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 NAA11Q9BSU3 229 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 PHF7Q9BWX1 381 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 RCC2Q9P258 522 aaKnown RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 NXPH3O95157 252 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 CELA2AP08217 269 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 GUSBP08236 651 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 KLK2P20151 261 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF585AQ6P3V2 769 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 TMEM71Q6P5X7 295 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 D2HGDHQ8N465 521 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms