RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 IGLV3-12A0A075B6K2 115 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 IGHV3-49A0A0A0MS15 119 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 LOC100653049A0A140TA62 436 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 C7orf66A4D0T2 115 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 A8MUU9 505 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 NDUFC2-KCTD14E9PQ53 114 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 DFFAO00273 331 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 RRP8O43159 456 aaKnown RBP1.52□□□□□ -2.17
CD47-203ENST00000398258 PLIN3O60664 434 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 KRT34O76011 436 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 VAPBO95292 243 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 PLEKHA8P1O95397 391 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 GCGP01275 180 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 IVLP07476 585 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 STAG3L2P0CL84 134 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 HOXB8P17481 243 aaPredicted RBP1.52□□□□□ -2.17
CD47-203ENST00000398258 APLNRP35414 380 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 PRLHRP49683 370 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 HCCSP53701 268 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 CARD18P57730 90 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 MLF1P58340 268 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 TAS2R60P59551 318 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 C2orf54Q08AI8 447 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 INCA1Q0VD86 236 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 NAB1Q13506 487 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 STK38Q15208 465 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 SNRNP35Q16560 246 aaKnown RBP1.52□□□□□ -2.17
CD47-203ENST00000398258 PRSS8Q16651 343 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 C6orf99Q4VX62 202 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 HSP90AA4PQ58FG1 418 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 YIF1BQ5BJH7 314 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 CPTPQ5TA50 214 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 OPN5Q6U736 354 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 HMGN2P46Q86SG4 172 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 MDP1Q86V88 176 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 ERO1BQ86YB8 467 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 SLC30A8Q8IWU4 369 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 ZNF101Q8IZC7 436 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 FAM58AQ8N1B3 248 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 LINC00469Q8N7U9 141 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 ZNF615Q8N8J6 731 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 ZNF709Q8N972 641 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 OR13C9Q8NGT0 318 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 ZFAND1Q8TCF1 268 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 RERGQ96A58 199 aaPredicted RBP1.52□□□□□ -2.17
CD47-203ENST00000398258 TSNAXQ99598 290 aaKnown RBP1.52□□□□□ -2.17
CD47-203ENST00000398258 CHID1Q9BWS9 393 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 RSPO3Q9BXY4 272 aaPredicted RBP1.52□□□□□ -2.17
CD47-203ENST00000398258 CHRNA10Q9GZZ6 450 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 ARV1Q9H2C2 271 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 ZSCAN16Q9H4T2 348 aaPredicted RBP1.52□□□□□ -2.17
CD47-203ENST00000398258 MARCOQ9UEW3 520 aaPredicted RBP1.52□□□□□ -2.17
CD47-203ENST00000398258 ENOPH1Q9UHY7 261 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 TFR2Q9UP52 801 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 WIF1Q9Y5W5 379 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 KPTNQ9Y664 436 aa1.52□□□□□ -2.17
CD47-203ENST00000398258 ZNF608Q9ULD9 1512 aaPredicted RBP1.51□□□□□ -2.17
CD47-203ENST00000398258 IGHV6-1A0A0B4J1U7 121 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 IGKV6-21A0A0C4DH24 114 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 IGHV1-3A0A0C4DH29 117 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 ANKRD20A5PA0PJZ0 165 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 GOLGA8JA6NMD2 632 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 RPL36A-HNRNPH2H7BZ11 118 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 MANBAO00462 879 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 SPOPO43791 374 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 RBBP9O75884 186 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 SMC2O95347 1197 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 CSTAP01040 98 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 LHBP01229 141 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 HLA-DQB1P01920 261 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 MBP02144 154 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 SLC35G6P0C7Q6 338 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 ZNF286BP0CG31 522 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 GOLGA8HP0CJ92 632 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 CELP19835 753 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 ARL2P36404 184 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 P2RY2P41231 377 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 SLC35A1P78382 337 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 ST3GAL4Q11206 333 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 VAMP3Q15836 100 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 ATP6V1FQ16864 119 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 LINC00303Q3SY05 128 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 FBXL19-AS1Q494R0 122 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 SLC25A25Q6KCM7 469 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 APOBEC3HQ6NTF7 200 aaKnown RBP1.51□□□□□ -2.17
CD47-203ENST00000398258 MORN3Q6PF18 240 aaPredicted RBP1.51□□□□□ -2.17
CD47-203ENST00000398258 IGFL1Q6UW32 110 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 NEGR1Q7Z3B1 354 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 NT5DC3Q86UY8 548 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 SLC7A5P1Q8MH63 180 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 ARHGAP18Q8N392 663 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 OR5T1Q8NG75 326 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 OR4A15Q8NGL6 344 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 OR13G1Q8NGZ3 307 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 SFXN5Q8TD22 340 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 RTN4IP1Q8WWV3 396 aaPredicted RBP1.51□□□□□ -2.17
CD47-203ENST00000398258 RXFP2Q8WXD0 754 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 GHSRQ92847 366 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 FAM131CQ96AQ9 280 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 S100PBPQ96BU1 408 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms