RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 F5H5P2 479 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 NDUFS8O00217 210 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 CD55P08174 381 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 ZNF16P17020 682 aaPredicted RBP21.52■■□□□ 1.04
U2AF1-203ENST00000398137 CCDC58Q4VC31 144 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 TMEM244Q5VVB8 128 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 RPL22L1Q6P5R6 122 aaKnown RBP21.52■■□□□ 1.04
U2AF1-203ENST00000398137 FTMTQ8N4E7 242 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 OR14K1Q8NGZ2 314 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 OR10AC1Q8NH08 325 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 PDCD1LG2Q9BQ51 273 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 YTHDF1Q9BYJ9 559 aaKnown RBP21.52■■□□□ 1.04
U2AF1-203ENST00000398137 SAP30LQ9HAJ7 183 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 PIGLQ9Y2B2 252 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 LSM2Q9Y333 95 aaKnown RBP21.52■■□□□ 1.04
U2AF1-203ENST00000398137 TMEM212A6NML5 194 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 LMX1BO60663 402 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 ZFPL1O95159 310 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 DAOP14920 347 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 ACHEP22303 614 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 GNALP38405 381 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 MAP2K4P45985 399 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 RIPPLY1Q0D2K3 151 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 OR5AK2Q8NH90 309 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 RPS4Y2Q8TD47 263 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 ITLN1Q8WWA0 313 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 OR5M11Q96RB7 305 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 PIMREGQ9BSJ6 248 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 BPESC1Q9GZL8 116 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 EGLN1Q9GZT9 426 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 SLC22A4Q9H015 551 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 COMMD4Q9H0A8 199 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 MYOZ1Q9NP98 299 aaPredicted RBP21.51■■□□□ 1.03
U2AF1-203ENST00000398137 NOP16Q9Y3C1 178 aaKnown RBP21.51■■□□□ 1.03
U2AF1-203ENST00000398137 ATRQ13535 2644 aa21.51■■□□□ 1.03
U2AF1-203ENST00000398137 IGHV3-64DA0A0J9YX35 117 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 ZNF816-ZNF321PA0A0X1KG74 233 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 PNMA8CA0A1B0GUJ8 204 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 ZNF850A8MQ14 1090 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 LYNX1G3V0Z9 82 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 ISG15P05161 165 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 LYNX1P0DP58 116 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 CDH15P55291 814 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 TAS2R43P59537 309 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 PRDX4Q13162 271 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 CARTPTQ16568 116 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 CYB5R2Q6BCY4 276 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 Q6ZSR3 168 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 PIGCQ92535 297 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 OR2V2Q96R30 315 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 PLEKHA1Q9HB21 404 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 ENPP5Q9UJA9 477 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 HHLA2Q9UM44 414 aa21.5■■□□□ 1.03
U2AF1-203ENST00000398137 A6NIN4 97 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 OGG1O15527 345 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 GMDSO60547 372 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 CDC14BO60729 498 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 CST4P01036 141 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 SLC3A1Q07837 685 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 SPHARQ15513 63 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 OR51A4Q8NGJ6 313 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 OR8S1Q8NH09 359 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 UBASH3BQ8TF42 649 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 ITFG2Q969R8 447 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 SMIM19Q96E16 107 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 MEGF10Q96KG7 1140 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 LRCH1Q9Y2L9 728 aa21.49■■□□□ 1.03
U2AF1-203ENST00000398137 DHRS7CA6NNS2 312 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 GIFP27352 417 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 HNRNPA0Q13151 305 aaKnown RBP21.48■■□□□ 1.03
U2AF1-203ENST00000398137 MED22Q15528 200 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 CHRFAM7AQ494W8 412 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 ZBTB37Q5TC79 503 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 DMKNQ6E0U4 476 aaPredicted RBP21.48■■□□□ 1.03
U2AF1-203ENST00000398137 OR13C3Q8NGS6 347 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 RGP1Q92546 391 aaPredicted RBP21.48■■□□□ 1.03
U2AF1-203ENST00000398137 MSI2Q96DH6 328 aaKnown RBP21.48■■□□□ 1.03
U2AF1-203ENST00000398137 TMEM160Q9NX00 188 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 IL19Q9UHD0 177 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 MPC1Q9Y5U8 109 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 CACNG2Q9Y698 323 aa21.48■■□□□ 1.03
U2AF1-203ENST00000398137 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.47■■□□□ 1.036e-8■■■□□ 16.7
U2AF1-203ENST00000398137 IGHV1-69-2A0A0G2JMI3 117 aa21.47■■□□□ 1.03
U2AF1-203ENST00000398137 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-203ENST00000398137 SRP9P49458 86 aaKnown RBP21.47■■□□□ 1.03
U2AF1-203ENST00000398137 TBCEQ15813 527 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-203ENST00000398137 ZDHHC23Q8IYP9 409 aa21.47■■□□□ 1.03
U2AF1-203ENST00000398137 CCDC54Q8NEL0 328 aa21.47■■□□□ 1.03
U2AF1-203ENST00000398137 RDH5Q92781 318 aa21.47■■□□□ 1.03
U2AF1-203ENST00000398137 YIPF5Q969M3 257 aa21.47■■□□□ 1.03
U2AF1-203ENST00000398137 TREM2Q9NZC2 230 aa21.47■■□□□ 1.03
U2AF1-203ENST00000398137 COL6A5A8TX70 2615 aa21.46■■□□□ 1.03
U2AF1-203ENST00000398137 ANXA2P2A6NMY6 339 aa21.46■■□□□ 1.03
U2AF1-203ENST00000398137 ZNF12P17014 697 aa21.46■■□□□ 1.03
U2AF1-203ENST00000398137 COL8A2P25067 703 aa21.46■■□□□ 1.03
U2AF1-203ENST00000398137 CD200P41217 278 aa21.46■■□□□ 1.03
U2AF1-203ENST00000398137 MAB21L1Q13394 359 aa21.46■■□□□ 1.03
U2AF1-203ENST00000398137 KCTD21Q4G0X4 260 aa21.46■■□□□ 1.03
U2AF1-203ENST00000398137 DMRTC1Q5HYR2 192 aa21.46■■□□□ 1.03
U2AF1-203ENST00000398137 CEP78Q5JTW2 689 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms