RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 TMEM42Q69YG0 159 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 VHLLQ6RSH7 139 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 OR5AS1Q8N127 324 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 OR8S1Q8NH09 359 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 LINC01560Q8TB33 94 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 TRMT10AQ8TBZ6 339 aaKnown RBP13.24□□□□□ -0.29
VAMP1-202ENST00000396308 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 S100ZQ8WXG8 99 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 PLPPR2Q96GM1 343 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 GPR160Q9UJ42 338 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 PURGQ9UJV8 347 aaKnown RBP13.24□□□□□ -0.29
VAMP1-202ENST00000396308 RHBDD3Q9Y3P4 386 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 ETV7Q9Y603 341 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 BSNQ9UPA5 3926 aa13.24□□□□□ -0.29
VAMP1-202ENST00000396308 TENM4Q6N022 2769 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 DIDO1Q9BTC0 2240 aaKnown RBP13.23□□□□□ -0.29
VAMP1-202ENST00000396308 FAM230AA0A1W2PPH8 454 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 PLSCR5A0PG75 271 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 DPRXA6NFQ7 191 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 OR5B21A6NL26 309 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 SLC2A2P11168 524 aaPredicted RBP13.23□□□□□ -0.29
VAMP1-202ENST00000396308 PRF1P14222 555 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 KITLGP21583 273 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 CFPP27918 469 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 GRNP28799 593 aaKnown RBP13.23□□□□□ -0.29
VAMP1-202ENST00000396308 TALDO1P37837 337 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 KIR2DL3P43628 341 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 RBP2P50120 134 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 FABP6P51161 128 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 TFF3Q07654 80 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 TNK1Q13470 666 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 RIN1Q13671 783 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 ASPHD2Q6ICH7 369 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 NR2C2APQ86WQ0 139 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 OR52N4Q8NGI2 321 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 UBASH3BQ8TF42 649 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 MICU1Q9BPX6 476 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 ADAT1Q9BUB4 502 aaKnown RBP13.23□□□□□ -0.29
VAMP1-202ENST00000396308 RTL8AQ9BWD3 113 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 LIN7BQ9HAP6 207 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
VAMP1-202ENST00000396308 RNF115Q9Y4L5 304 aa13.23□□□□□ -0.29
VAMP1-202ENST00000396308 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-202ENST00000396308 CYSRT1A8MQ03 144 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 FAM25AB3EWG3 89 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 FAM25CB3EWG5 89 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 FAM25GB3EWG6 89 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 CYB5AP00167 134 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 UBBP0CG47 229 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 MPV17P39210 176 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 BMXP51813 675 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 MTCP1P56278 107 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 NKX6-1P78426 367 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-202ENST00000396308 PSG7Q13046 419 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 LSAMPQ13449 338 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 CDSNQ15517 529 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 OR8G1Q15617 311 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 KISS1Q15726 138 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 UBE2V2Q15819 145 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 CEACAM21Q3KPI0 293 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 AWAT2Q6E213 333 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 ADAM5Q6NVV9 412 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 C22orf34Q6ZV56 151 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 OR8G5Q8NG78 346 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 OR6Q1Q8NGQ2 317 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 LGALS14Q8TCE9 139 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 PHF21AQ96BD5 680 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 GFI1Q99684 422 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 SLC30A2Q9BRI3 323 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 ZNF442Q9H7R0 627 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 TMEM100Q9NV29 134 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 DUSP13Q9UII6 198 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 MRPS28Q9Y2Q9 187 aaKnown RBP13.22□□□□□ -0.29
VAMP1-202ENST00000396308 PMF1-BGLAPU3KQ54 211 aa13.22□□□□□ -0.29
VAMP1-202ENST00000396308 BPNT1O95861 308 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 PLA2G2AP14555 144 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 ZNF250P15622 560 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 ARSBP15848 533 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 CA6P23280 308 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 P2RY14Q15391 338 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 FAM189A2Q15884 450 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 UBE2NLQ5JXB2 153 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 C1orf100Q5SVJ3 147 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 LRRC28Q86X40 367 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-202ENST00000396308 SAMD12Q8N8I0 201 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 SPERTQ8NA61 448 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 OR5A2Q8NGI9 324 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 OR13G1Q8NGZ3 307 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 TBC1D15Q8TC07 691 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 FAM222BQ8WU58 562 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 WDR12Q9GZL7 423 aaKnown RBP13.21□□□□□ -0.29
VAMP1-202ENST00000396308 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.29
VAMP1-202ENST00000396308 CYSLTR2Q9NS75 346 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 CA10Q9NS85 328 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 GHRLQ9UBU3 117 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 FZR1Q9UM11 496 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms