RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 POC1BQ8TC44 478 aa16.17■□□□□ 0.18
PCDHA1-202ENST00000394633 AQP10Q96PS8 301 aa16.17■□□□□ 0.18
PCDHA1-202ENST00000394633 TREM1Q9NP99 234 aa16.17■□□□□ 0.18
PCDHA1-202ENST00000394633 PNRC2Q9NPJ4 139 aaKnown RBP16.17■□□□□ 0.18
PCDHA1-202ENST00000394633 LY6G6EA0A0G2JKS1 128 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 RER1O15258 196 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 DUX1O43812 170 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 AMY2BP19961 511 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 TRIM61Q5EBN2 209 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 CARD17Q5XLA6 110 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 SLC25A47Q6Q0C1 308 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 DRAM2Q6UX65 266 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 ANKRD37Q7Z713 158 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 TMEM200AQ86VY9 491 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 OR56B1Q8NGI3 324 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 SSC4DQ8WTU2 575 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 ASH2LQ9UBL3 628 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 OSGIN2Q9Y236 505 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 U3KQA8 63 aa16.16■□□□□ 0.18
PCDHA1-202ENST00000394633 IGKV1-9A0A0C4DH69 117 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 ZNF705EA8MWA4 302 aaPredicted RBP16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 TRAF3IP2O43734 574 aaPredicted RBP16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 IGHG1P01857 330 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 PVALBP20472 110 aaPredicted RBP16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 NPBWR1P48145 328 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 GABREP78334 506 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 PJVKQ0ZLH3 352 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 RAB32Q13637 225 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 ARFRP1Q13795 201 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 PLPPR5Q32ZL2 321 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 DMRTC1Q5HYR2 192 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 TCEAL6Q6IPX3 200 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 RNF138Q8WVD3 245 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 TCEAL3Q969E4 200 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 GPER1Q99527 375 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 SLC26A1Q9H2B4 701 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 OR2S2Q9NQN1 319 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 UQCC1Q9NVA1 299 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 KLRF1Q9NZS2 232 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 PPP4R1LQ9P1A2 415 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 SEMA5BQ9P283 1151 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 LPAR3Q9UBY5 353 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 MLXQ9UH92 298 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 LHX6Q9UPM6 363 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 ASCC3Q8N3C0 2202 aaKnown RBP16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 PCP4L1A6NKN8 68 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 ZNF814B7Z6K7 855 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 SDCBPO00560 298 aaPredicted RBP16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 HTR3BO95264 441 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 RPS2P15880 293 aaKnown RBP16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 CCL1P22362 96 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 ZNF41P51814 821 aaPredicted RBP16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 GFOD2Q3B7J2 385 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 GUSBP11Q6P575 273 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 IL34Q6ZMJ4 242 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 POC1AQ8NBT0 407 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 ADAMTS17Q8TE56 1095 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 ZNF775Q96BV0 537 aaPredicted RBP16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 MRGPRX4Q96LA9 322 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 C2orf50Q96LR7 162 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 SLC5A7Q9GZV3 580 aa16.15■□□□□ 0.18
PCDHA1-202ENST00000394633 ZNF318Q5VUA4 2279 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 A0A1W2PNR3 127 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 CSTBP04080 98 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 GLRA1P23415 457 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 IL15RAQ13261 267 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 SLC25A53Q5H9E4 307 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 SHEQ5VZ18 495 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 FAM57BQ71RH2 274 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 RAB11FIP2Q7L804 512 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 SCGB3A2Q96PL1 93 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 URM1Q9BTM9 101 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 ST6GALNAC5Q9BVH7 336 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 SEC11CQ9BY50 192 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 TGIF2Q9GZN2 237 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 OR10A2Q9H208 303 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 METTL8Q9H825 291 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 NCOA6Q14686 2063 aaPredicted RBP16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 MYO7BQ6PIF6 2116 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 TRBV11-1A0A0K0K1C0 115 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 C5orf63A6NC05 138 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 E9PLN8 166 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 PTGDSP41222 190 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 CBX5P45973 191 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 CRIP3Q6Q6R5 217 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 DOK3Q7L591 496 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 SPAG16Q8N0X2 631 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 FAM89BQ8N5H3 189 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 MAFIPQ8WZ33 124 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 ACKR4Q9NPB9 350 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 SDHAF3Q9NRP4 125 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 FAM96BQ9Y3D0 163 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 KMT2EQ8IZD2 1858 aa16.14■□□□□ 0.17
PCDHA1-202ENST00000394633 SNAPINO95295 136 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 OR3A2P47893 321 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 SNU13P55769 128 aaKnown RBP16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 C1QL2Q7Z5L3 287 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 OR51T1Q8NGJ9 327 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 OR14K1Q8NGZ2 314 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 HRH4Q9H3N8 390 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms