RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 A0A1W2PPE2 198 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 NEURL1O76050 574 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 TBXA2RP21731 343 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 PSMB2P49721 201 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 CDKN3Q16667 212 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 PRSS54Q6PEW0 395 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 TMPRSS13Q9BYE2 586 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 HS3ST2Q9Y278 367 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 AMDHD2Q9Y303 409 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 PCDHGA9Q9Y5G4 932 aaKnown RBP10.69□□□□□ -0.7
SYNPO-202ENST00000394243 CLN3Q13286 438 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 OR10A7Q8NGE5 316 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 VN1R17PQ8TDU5 208 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 VN1R1Q9GZP7 353 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 LYRM4Q9HD34 91 aa10.69□□□□□ -0.7
SYNPO-202ENST00000394243 ADAM20O43506 726 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 FBP1P09467 338 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 DHRS13Q6UX07 377 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 SLC39A11Q8N1S5 342 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 SLC26A10Q8NG04 563 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 OR5AU1Q8NGC0 362 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 FUT9Q9Y231 359 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 C5orf52A6NGY3 159 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 SERPINE3A8MV23 424 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 SCRG1O75711 98 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 ZNF121P58317 390 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-202ENST00000394243 OR5D13Q8NGL4 314 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 MCHR2Q969V1 340 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 RHOVQ96L33 236 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 SLC25A22Q9H936 323 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 A0A1B0GTL3 188 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 FAM24AA6NFZ4 105 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 CAMPP49913 170 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 COL5A1-AS1Q5SY13 56 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 OSR2Q8N2R0 312 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 FAAP24Q9BTP7 215 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 RAB33BQ9H082 229 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 EPHX3Q9H6B9 360 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 KCND3Q9UK17 655 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 FBLL1A6NHQ2 334 aaKnown RBP10.68□□□□□ -0.7
SYNPO-202ENST00000394243 SPRY1O43609 319 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-202ENST00000394243 HTR1DP28221 377 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 LIMK1P53667 647 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 FAM219BQ5XKK7 198 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 COMMD5Q9GZQ3 224 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 NAT8Q9UHE5 227 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 HSF4Q9ULV5 492 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 WASHC3Q9Y3C0 194 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 CICQ96RK0 1608 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-202ENST00000394243 H3BVH4 76 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 HOXC13P31276 330 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 NOVP48745 357 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 EMDP50402 254 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 TMEM33P57088 247 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 PNRC1Q12796 327 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-202ENST00000394243 HLA-DRB5Q30154 266 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 B3GNTL1Q67FW5 361 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-202ENST00000394243 ACY3Q96HD9 319 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 BCL2L10Q9HD36 194 aa10.68□□□□□ -0.7
SYNPO-202ENST00000394243 OR2M5A3KFT3 312 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 GFYI3L273 518 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 SIAH2O43255 324 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 PLPP2O43688 288 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 IGHA1P01876 353 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 ZNF865P0CJ78 1059 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-202ENST00000394243 PTGFRP43088 359 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 BSXQ3C1V8 233 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 OR4A47Q6IF82 309 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 ZNF880Q6PDB4 577 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 LILRB1Q8NHL6 650 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-202ENST00000394243 ARRDC3Q96B67 414 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 ADAT1Q9BUB4 502 aaKnown RBP10.67□□□□□ -0.7
SYNPO-202ENST00000394243 TMED3Q9Y3Q3 217 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 NALCNQ8IZF0 1738 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 ZNF253O75346 499 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 INHBBP09529 407 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 STAG3L2P0CL84 134 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 SLC6A12P48065 614 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 CD81P60033 236 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 HSF5Q4G112 596 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-202ENST00000394243 TMEM65Q6PI78 240 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 ADAMTSL4Q6UY14 1074 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 KLK8O60259 260 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 ETHE1O95571 254 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 HRASP01112 189 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 KRASP01116 189 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 GLB1P16278 677 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 PXNP49023 591 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-202ENST00000394243 TUSC1Q2TAM9 212 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 SLC25A26Q70HW3 274 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 OR10X1Q8NGY0 326 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 TTC9Q92623 222 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 S1PR3Q99500 378 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 A4GNTQ9UNA3 340 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 POLDIP2Q9Y2S7 368 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 MMACHCQ9Y4U1 282 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 FIGNL2A6NMB9 653 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 RRP8O43159 456 aaKnown RBP10.67□□□□□ -0.7
SYNPO-202ENST00000394243 FAM87AP0C7U9 286 aa10.67□□□□□ -0.7
SYNPO-202ENST00000394243 CD46P15529 392 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms