RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 CACNG3O60359 315 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 CTNSO60931 367 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 CLTAP09496 248 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 CXCR1P25024 350 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 IL3RAP26951 378 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 STOMP27105 288 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 APLNRP35414 380 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 ACOT2P49753 483 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 ERFP50548 548 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 TSC22D1Q15714 1073 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 C6orf99Q4VX62 202 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 ARMC12Q5T9G4 340 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 KDM4DQ6B0I6 523 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 TMEM220Q6QAJ8 160 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 FAM131AQ6UXB0 335 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 FA2HQ7L5A8 372 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 BBS7Q8IWZ6 715 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 RPRMLQ8N4K4 120 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 LINC00469Q8N7U9 141 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR4C13Q8NGP0 309 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 ZNF420Q8TAQ5 688 aaPredicted RBP0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 RERGQ96A58 199 aaPredicted RBP0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 AGMATQ9BSE5 352 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 C20orf24Q9BUV8 137 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 DUSP21Q9H596 190 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 FANCEQ9HB96 536 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 ACP6Q9NPH0 428 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 AGPAT4Q9NRZ5 378 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 CA10Q9NS85 328 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 TMCC3Q9ULS5 477 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 ADAMTSL3P82987 1691 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 MED13Q9UHV7 2174 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 INSRP06213 1382 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 TMEM72A0PK05 275 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 IZUMO1RA6ND01 250 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 E7EQL1 145 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 LINC01619G3V211 115 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 C3orf84H3BNL1 204 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 CCDC22O60826 627 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 KCNK2O95069 426 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 TGM6O95932 706 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 PRB1P04280 392 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR5AC1P0C628 307 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 GABRG2P18507 467 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 RAB5AP20339 215 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 RFC3P40938 356 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 FOXA1P55317 472 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 TAS2R39P59534 338 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 PPP1CAP62136 330 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 SLC9A3R2Q15599 337 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR1Q1Q15612 314 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 HADHQ16836 314 aaKnown RBP0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 CPTPQ5TA50 214 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 STEAP4Q687X5 459 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 ZYG11AQ6WRX3 759 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 APRG1Q8IVJ8 170 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 PQLC3Q8N755 202 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 ZFP62Q8NB50 900 aaPredicted RBP0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 TSEN15Q8WW01 171 aaKnown RBP0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 CDS1Q92903 461 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 PRRC1Q96M27 445 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 UCK2Q9BZX2 261 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 ABCG5Q9H222 651 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 TMEM185BQ9H7F4 350 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 ASF1BQ9NVP2 202 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 MCTS1Q9ULC4 181 aaKnown RBP0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 SAR1BQ9Y6B6 198 aa0.73□□□□□ -2.29
RNU6-541P-201ENST00000384709 COL6A6A6NMZ7 2263 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 IGHV6-1A0A0B4J1U7 121 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR2AG2A6NM03 316 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 AQP9O43315 295 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 WBP4O75554 376 aaKnown RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 CCNB2O95067 398 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 FARS2O95363 451 aaKnown RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 HLA-HP01893 362 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 THRAP10827 490 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 GTF2E2P29084 291 aaKnown RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 PRSS3P35030 304 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 GGT2P36268 569 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 NBL1P41271 181 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR1G1P47890 313 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 RAB9AP51151 201 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 C21orf59P57076 290 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 RGS8P57771 180 aaPredicted RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 ILKQ13418 452 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 TRMT5Q32P41 509 aaKnown RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 ALKBH6Q3KRA9 238 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 PCOTHQ58A44 107 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 CARD17Q5XLA6 110 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 RWDD4Q6NW29 188 aaKnown RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 METAP1DQ6UB28 335 aaPredicted RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 Q6ZSR6 202 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 VKORC1L1Q8N0U8 176 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 JAGN1Q8N5M9 183 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 C3orf22Q8N5N4 141 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 C8orf31Q8N9H6 132 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR2M7Q8NG81 312 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR4M2Q8NGB6 313 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 MRPL48Q96GC5 212 aaKnown RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 RDH12Q96NR8 316 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms