RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PDP1Q9P0J1 537 aaPredicted RBP10.75□□□□□ -0.69
RPAIN-202ENST00000381208 RPUSD1Q9UJJ7 312 aaKnown RBP10.75□□□□□ -0.69
RPAIN-202ENST00000381208 TRRAPQ9Y4A5 3859 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 ACOD1A6NK06 481 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 GYG2O15488 501 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 NDUFB3O43676 98 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 E2F6O75461 281 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 CST4P01036 141 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 KNG1P01042 644 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 IGHV1-69P01742 117 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 SFTPBP07988 381 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 OSMP13725 252 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 ANOS1P23352 680 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 POU1F1P28069 291 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 GINS1Q14691 196 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 LINC01559Q495D7 138 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 DNAL1Q4LDG9 190 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 LRRC10Q5BKY1 277 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 ATPAF1Q5TC12 328 aaPredicted RBP10.74□□□□□ -0.69
RPAIN-202ENST00000381208 DEGS2Q6QHC5 323 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 METAP1DQ6UB28 335 aaPredicted RBP10.74□□□□□ -0.69
RPAIN-202ENST00000381208 ASRGL1Q7L266 308 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 C11orf53Q8IXP5 236 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 ADGRG5Q8IZF4 528 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 IQCF1Q8N6M8 205 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 KIR3DL3Q8N743 410 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 THEM6Q8WUY1 208 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 LRTOMTQ8WZ04 291 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 ST8SIA4Q92187 359 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 DYRK2Q92630 601 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 ITPKCQ96DU7 683 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 HIST1H2AAQ96QV6 131 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 SIRPDQ9H106 197 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 TAS2R1Q9NYW7 299 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 DNAJC27Q9NZQ0 273 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 RHBDD3Q9Y3P4 386 aa10.74□□□□□ -0.69
RPAIN-202ENST00000381208 MDFIC2A0A1B0GVS7 189 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 ACOT8O14734 319 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 CDIPTO14735 213 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 MELTFP08582 738 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 ATP6V1B1P15313 513 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 RAG2P55895 527 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 PSMA6P60900 246 aaKnown RBP10.73□□□□□ -0.69
RPAIN-202ENST00000381208 ARF6P62330 175 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 GFOD2Q3B7J2 385 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 FAM76BQ5HYJ3 339 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 WDR38Q5JTN6 314 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 PLBD1Q6P4A8 553 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 KCTD18Q6PI47 426 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-202ENST00000381208 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
RPAIN-202ENST00000381208 C17orf107Q6ZR85 190 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 LDLRAD3Q86YD5 345 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 SCCPDHQ8NBX0 429 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 LHX4Q969G2 390 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 MED30Q96HR3 178 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 THTPAQ9BU02 230 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 DPAGT1Q9H3H5 408 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 MED20Q9H944 212 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 BRD7Q9NPI1 651 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 DNAJB11Q9UBS4 358 aa10.73□□□□□ -0.69
RPAIN-202ENST00000381208 SOX21Q9Y651 276 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-202ENST00000381208 NKX6-3A6NJ46 265 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 MDKP21741 143 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-202ENST00000381208 EEF1B2P24534 225 aaKnown RBP10.72□□□□□ -0.69
RPAIN-202ENST00000381208 TGM4P49221 684 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 CDK5Q00535 292 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 OCLNQ16625 522 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 KLHL12Q53G59 568 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 RUSC1-AS1Q66K80 236 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 OLFML2AQ68BL7 652 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 STUMQ69YW2 141 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 C1orf122Q6ZSJ8 110 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 KRT74Q7RTS7 529 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 WDR86Q86TI4 376 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 ZDHHC23Q8IYP9 409 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 C8orf46Q8TAG6 207 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 CANT1Q8WVQ1 401 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 OR5P3Q8WZ94 311 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 CCL13Q99616 98 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 PRRG3Q9BZD7 231 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 CHIAQ9BZP6 476 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 YIPF3Q9GZM5 350 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 HAO2Q9NYQ3 351 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 LAMP5Q9UJQ1 280 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 FAM96BQ9Y3D0 163 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 TMEM14AQ9Y6G1 99 aa10.72□□□□□ -0.69
RPAIN-202ENST00000381208 IGHV3OR15-7A0A075B7D8 119 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 A0A0U1RQV5 110 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 ZNF816-ZNF321PA0A0X1KG74 233 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 CLPSL1A2RUU4 121 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 BTBD17A6NE02 478 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 FBP1P09467 338 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 ALOX5APP20292 161 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 DCTDP32321 178 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 MAP2K3P46734 347 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 RPS7P62081 194 aaKnown RBP10.71□□□□□ -0.69
RPAIN-202ENST00000381208 CSNK2BP67870 215 aa10.71□□□□□ -0.69
RPAIN-202ENST00000381208 HOXA4Q00056 320 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms