RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RAB40BQ12829 278 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 C20orf204Q6ZNR8 217 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 RDH10Q8IZV5 341 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 ACBD7Q8N6N7 88 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 CSNK2A3Q8NEV1 391 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 OR10AD1Q8NGE0 317 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 OR13C9Q8NGT0 318 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 ADAMTS17Q8TE56 1095 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 CCDC107Q8WV48 283 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 FAM46BQ96A09 425 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 SLC25A28Q96A46 364 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 UCN2Q96RP3 112 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 MNTQ99583 582 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 OR52D1Q9H346 318 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 A4GNTQ9UNA3 340 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 PCYT1BQ9Y5K3 369 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-202ENST00000379446 NLRC5Q86WI3 1866 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 MEIS3P1A6NDR6 274 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 F8W036 122 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 TRAPPC2P0DI81 140 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 TRAPPC2BP0DI82 140 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 USF1P22415 310 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-202ENST00000379446 CA6P23280 308 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 VEGFCP49767 419 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 BLOC1S1P78537 153 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 BAMBIQ13145 260 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 FAM27D1Q5T7N8 215 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 TMEM244Q5VVB8 128 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 OTPQ5XKR4 325 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF425Q6IV72 752 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 PLXDC2Q6UX71 529 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 SHISA5Q8N114 240 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 DMBX1Q8NFW5 382 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 THAP6Q8TBB0 222 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 TOMM40LQ969M1 308 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 CMBLQ96DG6 245 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 PFDN5Q99471 154 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 ALG8Q9BVK2 526 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 POLE3Q9NRF9 147 aa5.79□□□□□ -1.48
NEDD9-202ENST00000379446 CHP2O43745 196 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 SCGB1D2O95969 90 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 RLN2P04090 185 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TCRBP04435 133 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 SHC1P29353 583 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 APOBEC3AP31941 199 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF117Q03924 483 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 PGGHGQ32M88 737 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 LINC00518Q8N0U6 118 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 C1orf162Q8NEQ5 155 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 OR11H4Q8NGC9 324 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 OR5D14Q8NGL3 314 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 OR51F2Q8NH61 342 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TMEM231Q9H6L2 316 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 KIF25Q9UIL4 384 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 PITPNC1Q9UKF7 332 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 HIF3AQ9Y2N7 669 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 GPR55Q9Y2T6 319 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 A0A087WV62 115 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 A0A1B0GV50 99 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TMEM229AB2RXF0 380 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 B9A039 149 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 CD14P08571 375 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 CELA3AP09093 270 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ELK1P19419 428 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 CDAP32320 146 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 FXYD6P3P58550 94 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ARF6P62330 175 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ACSF3Q4G176 576 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 SHEQ5VZ18 495 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 VWA1Q6PCB0 445 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 DCXRQ7Z4W1 244 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 SIAH3Q8IW03 269 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 LINC00469Q8N7U9 141 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 C8orf46Q8TAG6 207 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 NMNAT3Q96T66 252 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 S1PR3Q99500 378 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 MIXL1Q9H2W2 232 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ASCL3Q9NQ33 180 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 OR2S2Q9NQN1 319 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 PIGLQ9Y2B2 252 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 MEMO1Q9Y316 297 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 UBE2J1Q9Y385 318 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 GTF3C1Q12789 2109 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 MED12Q93074 2177 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 IGKV3-7A0A075B6H7 116 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 PPIAL4EA0A075B759 164 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 OR6C6A6NF89 314 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 OR2AT4A6NND4 320 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 NPIPB8E9PQR5 432 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 PPIAL4DF5H284 164 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 P2RY10O00398 339 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 BET1O15155 118 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 MAGEB4O15481 346 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 LINC00271P0C7V0 271 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 PPIAL4FP0DN26 164 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 AMY2BP19961 511 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 GABRA5P31644 462 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 AKR1C3P42330 323 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 HMGA2P52926 109 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 RPL27P61353 136 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms