RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ACTG1P63261 375 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 SEZ6L2Q6UXD5 910 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 LINC00696Q6ZRV3 163 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 NLRC3Q7RTR2 1065 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 ZNF101Q8IZC7 436 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 WBP1Q96G27 269 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 ALKBH3Q96Q83 286 aaPredicted RBP13.03□□□□□ -0.32
PRNP-201ENST00000379440 DPCDQ9BVM2 203 aaPredicted RBP13.03□□□□□ -0.32
PRNP-201ENST00000379440 GSX2Q9BZM3 304 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 CHIAQ9BZP6 476 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 IGKV1-9A0A0C4DH69 117 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 SULT1C2O00338 296 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 TOXO94900 526 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 BPNT1O95861 308 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 HCKP08631 526 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 PATE4P0C8F1 98 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 GFRA1P56159 465 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 HIST1H3AP68431 136 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 ZNF260Q3ZCT1 412 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 HIST2H3PS2Q5TEC6 136 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 ABHD17BQ5VST6 288 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 GLIPR1L1Q6UWM5 242 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 HIST2H3AQ71DI3 136 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 AAED1Q7RTV5 226 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 MEIOBQ8N635 442 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 OR4S1Q8NGB4 309 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 NICN1Q9BSH3 213 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 REG4Q9BYZ8 158 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 CHST6Q9GZX3 395 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 TMEM9BQ9NQ34 198 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 CA10Q9NS85 328 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 NDRG3Q9UGV2 375 aa13.03□□□□□ -0.32
PRNP-201ENST00000379440 C21orf140B9A014 251 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 DNASE2O00115 360 aaPredicted RBP13.02□□□□□ -0.32
PRNP-201ENST00000379440 RAB3DO95716 219 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 MECP2P51608 486 aaKnown RBP13.02□□□□□ -0.32
PRNP-201ENST00000379440 TAS2R19P59542 299 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 MRPS34P82930 218 aaKnown RBP13.02□□□□□ -0.32
PRNP-201ENST00000379440 SPEM2Q0P670 501 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 CDNFQ49AH0 187 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 DCAF10Q5QP82 559 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 FAM27BQ5VT28 67 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 PGAP1Q75T13 922 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 SLC36A1Q7Z2H8 476 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 TMEM104Q8NE00 496 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 NPRL2Q8WTW4 380 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 ABHD3Q8WU67 409 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 AQP3Q92482 292 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 CYYR1Q96J86 154 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 MIOXQ9UGB7 285 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 KIF25Q9UIL4 384 aa13.02□□□□□ -0.32
PRNP-201ENST00000379440 MRPS28Q9Y2Q9 187 aaKnown RBP13.02□□□□□ -0.32
PRNP-201ENST00000379440 A0A0A6YYH2 397 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 A0A1W2PP11 408 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 A6NJ64 397 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 ERCC1P07992 297 aaPredicted RBP13.02□□□□□ -0.33
PRNP-201ENST00000379440 GNB3P16520 340 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 SSBP1Q04837 148 aaKnown RBP13.02□□□□□ -0.33
PRNP-201ENST00000379440 SLC22A6Q4U2R8 563 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 PABPC1L2AQ5JQF8 200 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 ZNF626Q68DY1 528 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 TMEM229BQ8NBD8 167 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 OR2M7Q8NG81 312 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 ADAMTS17Q8TE56 1095 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 WDR89Q96FK6 387 aaPredicted RBP13.02□□□□□ -0.33
PRNP-201ENST00000379440 MGAT4CQ9UBM8 478 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 NPTNQ9Y639 398 aa13.02□□□□□ -0.33
PRNP-201ENST00000379440 TMEM14DPA8MWL7 114 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 M0R135 149 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 CREBL2O60519 120 aaPredicted RBP13.01□□□□□ -0.33
PRNP-201ENST00000379440 IGHV2-70P01814 119 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 IL5P05113 134 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 B4GALT1P15291 398 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 UBE2MP61081 183 aaKnown RBP13.01□□□□□ -0.33
PRNP-201ENST00000379440 SRYQ05066 204 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 CHMP1BQ7LBR1 199 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 SLC16A13Q7RTY0 426 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 FJX1Q86VR8 437 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 GVQW1Q8N7I0 195 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 OR2T35Q8NGX2 323 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 NUDCD2Q8WVJ2 157 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 ZNF799Q96GE5 643 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 SELENOIQ9C0D9 397 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 BANF2Q9H503 90 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 BOKQ9UMX3 212 aaPredicted RBP13.01□□□□□ -0.33
PRNP-201ENST00000379440 TTC28Q96AY4 2481 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 G3V3Q6 166 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 CYB5AP00167 134 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 IGLV3-1P01715 115 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 CSN2P05814 226 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 PRF1P14222 555 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 DNASE1P24855 282 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 OTX1P32242 354 aaPredicted RBP13.01□□□□□ -0.33
PRNP-201ENST00000379440 EIF3IQ13347 325 aaKnown RBP13.01□□□□□ -0.33
PRNP-201ENST00000379440 SNAI3Q3KNW1 292 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 SFRP5Q5T4F7 317 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 ABLIM2Q6H8Q1 611 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 RAB12Q6IQ22 244 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 SULF2Q8IWU5 870 aa13.01□□□□□ -0.33
PRNP-201ENST00000379440 OR5D18Q8NGL1 313 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms