RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 M0R1X1 148 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 NME2P1O60361 137 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 VMA21Q3ZAQ7 101 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 CLDN23Q96B33 292 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 CMBLQ96DG6 245 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 TSPAN32Q96QS1 320 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 MAGT1Q9H0U3 335 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 DEFB108AA8MXU0 73 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 PLEKHB1Q9UF11 243 aaPredicted RBP12.18□□□□□ -0.46
GPC6-201ENST00000377047 AQP7P3A6NL99 342 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 COX7A1P24310 79 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 EPHA2P29317 976 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 BTG1P62324 171 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 TMPRSS11FQ6ZWK6 438 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 DUS3LQ96G46 650 aaKnown RBP12.18□□□□□ -0.46
GPC6-201ENST00000377047 ZNF768Q9H5H4 540 aaKnown RBP12.18□□□□□ -0.46
GPC6-201ENST00000377047 COX7A2P2O60397 106 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 SLC25A6P12236 298 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 TLE1Q04724 770 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 CALHM3Q86XJ0 350 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 LRRC29Q8WV35 223 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 MITD1Q8WV92 249 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 CIB3Q96Q77 187 aaPredicted RBP12.18□□□□□ -0.46
GPC6-201ENST00000377047 LAMP3Q9UQV4 416 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 SERTM2A0A1B0GWG4 89 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 PATE4P0C8F1 98 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 PRSS42Q7Z5A4 293 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 SPSB1Q96BD6 273 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 WDR34Q96EX3 536 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 ACY3Q96HD9 319 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 DERL3Q96Q80 235 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 AUNIPQ9H7T9 357 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 HES4Q9HCC6 221 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 TIMM9Q9Y5J7 89 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 TXNL1O43396 289 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 HYAL3O43820 417 aaPredicted RBP12.17□□□□□ -0.46
GPC6-201ENST00000377047 NGFP01138 241 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 CTRB1P17538 263 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 SLC25A1P53007 311 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 ACOT6Q3I5F7 207 aaPredicted RBP12.17□□□□□ -0.46
GPC6-201ENST00000377047 SLC25A35Q3KQZ1 300 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 CTRB2Q6GPI1 263 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 SLC38A6Q8IZM9 456 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 POM121L2Q96KW2 1035 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 CMTM3Q96MX0 182 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 RASL10BQ96S79 203 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 C3orf80F5H4A9 247 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 FXYD1O00168 92 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 TBX19O60806 448 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 FUT3P21217 361 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 RAB5CP51148 216 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 WNT3P56703 355 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 D2HGDHQ8N465 521 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 ZFP62Q8NB50 900 aaPredicted RBP12.17□□□□□ -0.46
GPC6-201ENST00000377047 FLVCR2Q9UPI3 526 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 ABCA3Q99758 1704 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 ZNF724A8MTY0 619 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 XRCC3O43542 346 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 TMEM41BQ5BJD5 291 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 FAM27D1Q5T7N8 215 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 LCN15Q6UWW0 184 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 CFHR5Q9BXR6 569 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 PLPP3O14495 311 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 SPINT1O43278 529 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 EPPINO95925 133 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 SMIM18P0DKX4 95 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 ZBTB25P24278 435 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 PCBP3P57721 371 aaKnown RBP12.17□□□□□ -0.46
GPC6-201ENST00000377047 BTN1A1Q13410 526 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 ARHGEF39Q8N4T4 335 aa12.17□□□□□ -0.46
GPC6-201ENST00000377047 CD82P27701 267 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 ZIC1Q15915 447 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 FAM58AQ8N1B3 248 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 ACTR3CQ9C0K3 210 aaPredicted RBP12.16□□□□□ -0.46
GPC6-201ENST00000377047 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 GOSR1O95249 250 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 PRR35P0CG20 571 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 Q56UQ5 140 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 BTNL3Q6UXE8 466 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 C20orf196Q8IYI0 205 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 TERB2Q8NHR7 220 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 ZNF835Q9Y2P0 537 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 UBR3Q6ZT12 1888 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 C20orf202A1L168 122 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 ASPDHA6ND91 283 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 CEACAM6P40199 344 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 RTN4IP1Q8WWV3 396 aaPredicted RBP12.16□□□□□ -0.46
GPC6-201ENST00000377047 C4orf45Q96LM5 186 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 PNLIPRP3Q17RR3 467 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 OR2T6Q8NHC8 308 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 NUBPLQ8TB37 319 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
GPC6-201ENST00000377047 ZG16BQ96DA0 208 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 AMDHD2Q9Y303 409 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 NUDT19A8MXV4 375 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 CD1EP15812 388 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 WDR38Q5JTN6 314 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 CBLN3Q6UW01 205 aa12.16□□□□□ -0.46
GPC6-201ENST00000377047 LYG1Q8N1E2 194 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms