RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MPZP25189 248 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 SRYQ05066 204 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 OR1C1Q15619 314 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 TRIP6Q15654 476 aaKnown RBP17.68■□□□□ 0.42
VSX1-202ENST00000376709 RIPPLY2Q5TAB7 128 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 LINC00696Q6ZRV3 163 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 C1QL2Q7Z5L3 287 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 SEMA6DQ8NFY4 1073 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 OR4K15Q8NH41 348 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 AKR7LQ8NHP1 331 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 PCNPQ8WW12 178 aaKnown RBP17.68■□□□□ 0.42
VSX1-202ENST00000376709 HAS2Q92819 552 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 ARHGAP5-AS1Q96IT6 56 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 ELL3Q9HB65 397 aaPredicted RBP17.68■□□□□ 0.42
VSX1-202ENST00000376709 IL17BQ9UHF5 180 aa17.68■□□□□ 0.42
VSX1-202ENST00000376709 LEUTXA8MZ59 168 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 SNAPC5O75971 98 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 RGS11O94810 467 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 PMP2P02689 132 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 SERPINA2P20848 420 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 HTR5AP47898 357 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 TMEM50BP56557 158 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 RPS27AP62979 156 aaKnown RBP17.67■□□□□ 0.42
VSX1-202ENST00000376709 SLC16A14Q7RTX9 510 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 REEP6Q96HR9 211 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 CELSR3Q9NYQ7 3312 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 ARPC5O15511 151 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 LCATP04180 440 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 MGMTP16455 207 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 ARFRP1Q13795 201 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 OPCMLQ14982 345 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 CLVS2Q5SYC1 327 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 CRIP3Q6Q6R5 217 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 Q6ZSR3 168 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 GALNTL5Q7Z4T8 443 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 OR10K1Q8NGX5 313 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 GPR35Q9HC97 309 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 PARD6AQ9NPB6 346 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 TIMM10BQ9Y5J6 103 aa17.67■□□□□ 0.42
VSX1-202ENST00000376709 FXYD6-FXYD2A0A087WZ82 144 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 CELA3AP09093 270 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 NAT2P11245 290 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
VSX1-202ENST00000376709 ALDH3B1P43353 468 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 SEC61A1P61619 476 aaKnown RBP17.66■□□□□ 0.42
VSX1-202ENST00000376709 PNLIPRP3Q17RR3 467 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 SULF2Q8IWU5 870 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 ZDHHC22Q8N966 263 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 STEAP2Q8NFT2 490 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 ADAMTS17Q8TE56 1095 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 ASB13Q8WXK3 278 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 MRGPRFQ96AM1 343 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 FXYD6Q9H0Q3 95 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 PLA2G3Q9NZ20 509 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 UBQLN2Q9UHD9 624 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 NOP16Q9Y3C1 178 aaKnown RBP17.66■□□□□ 0.42
VSX1-202ENST00000376709 PCNX2A6NKB5 2137 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 FAM166BA8MTA8 275 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 MCRIP1C9JLW8 97 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 CD34P28906 385 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 GMFBP60983 142 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 PCBD1P61457 104 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 PSG4Q00888 419 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 HGFACQ04756 655 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 GPR173Q9NS66 373 aa17.66■□□□□ 0.42
VSX1-202ENST00000376709 NOSIPQ9Y314 301 aaKnown RBP17.66■□□□□ 0.42
VSX1-202ENST00000376709 RPS10-NUDT3A0A1W2PQS6 291 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 OR6C6A6NF89 314 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 MFNGO00587 321 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 MRPL33O75394 65 aaKnown RBP17.65■□□□□ 0.42
VSX1-202ENST00000376709 RAD51DO75771 328 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 IGHV3-9P01782 118 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 HPNP05981 417 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 ACKR3P25106 362 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 AIMP2Q13155 320 aaKnown RBP17.65■□□□□ 0.42
VSX1-202ENST00000376709 SLC25A42Q86VD7 318 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 OR2H1Q9GZK4 316 aa17.65■□□□□ 0.42
VSX1-202ENST00000376709 OR2AT4A6NND4 320 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 DHRS7CA6NNS2 312 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 HMSDA8MTL9 139 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 ZNF24P17028 368 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 MAGEA5P43359 124 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 LHX2P50458 406 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 RIPPLY1Q0D2K3 151 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 MICBQ29980 383 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 FAM89BQ8N5H3 189 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 TTTY12Q9BZ98 90 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 MAB21L2Q9Y586 359 aa17.64■□□□□ 0.42
VSX1-202ENST00000376709 LINC00862A6NCI5 91 aa17.64■□□□□ 0.41
VSX1-202ENST00000376709 FARS2O95363 451 aaKnown RBP17.64■□□□□ 0.41
VSX1-202ENST00000376709 BLVRBP30043 206 aaPredicted RBP17.64■□□□□ 0.41
VSX1-202ENST00000376709 MTCP1P56278 107 aa17.64■□□□□ 0.41
VSX1-202ENST00000376709 LIN54Q6MZP7 749 aa17.64■□□□□ 0.41
VSX1-202ENST00000376709 PIP4P1Q86T03 277 aa17.64■□□□□ 0.41
VSX1-202ENST00000376709 SKA3Q8IX90 412 aa17.64■□□□□ 0.41
VSX1-202ENST00000376709 TMEM45BQ96B21 275 aa17.64■□□□□ 0.41
VSX1-202ENST00000376709 OTOGLQ3ZCN5 2332 aa17.64■□□□□ 0.41
VSX1-202ENST00000376709 SORDQ00796 357 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 PLGLB1Q02325 96 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 PPP1R1AQ13522 171 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms