RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 SLC35A1P78382 337 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 SURF2Q15527 256 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 ANKRD55Q3KP44 614 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 PDSS1Q5T2R2 415 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 UNQ6126/PRO20091Q6UXV3 157 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 FAM57BQ71RH2 274 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 BAP18Q8IXM2 172 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 CLRN3Q8NCR9 226 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 DCUN1D4Q92564 292 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 FAM71F1Q96KD3 344 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 PURGQ9UJV8 347 aaKnown RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 PRUNE2Q8WUY3 3088 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 A0A1W2PQM1 296 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 SIGLEC5O15389 551 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 HCKP08631 526 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 ADCYAP1P18509 176 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 NPY4RP50391 375 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 SIGLEC14Q08ET2 396 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 ENDOGQ14249 297 aaKnown RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 KISS1Q15726 138 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 FAM74A3Q4VXF1 159 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 DTX1Q86Y01 620 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 POC1AQ8NBT0 407 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 OR10Z1Q8NGY1 313 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 NABP1Q96AH0 204 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 C10orf35Q96D05 121 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 ZNF416Q9BWM5 594 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 IFT22Q9H7X7 185 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 DECR2Q9NUI1 292 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 DNAJB11Q9UBS4 358 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 POLR1DQ9Y2S0 133 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 TNRC6BQ9UPQ9 1833 aaKnown RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 A0A087WZY1 265 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 LOC102723996A0A087X1L8 192 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 IGHV5-10-1A0A0J9YXX1 117 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 C13orf42A0A1B0GVH6 325 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 FIGNL2A6NMB9 653 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 CRTAPO75718 401 aaPredicted RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 OPN1LWP04000 364 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 CD63P08962 238 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 SUCLG1P53597 346 aaKnown RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 PPA1Q15181 289 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 MST1LQ2TV78 715 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 CARD17Q5XLA6 110 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 LINC00518Q8N0U6 118 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 GTPBP8Q8N3Z3 284 aaPredicted RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 SPEM1Q8N4L4 309 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 CCDC54Q8NEL0 328 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 OR5H2Q8NGV7 314 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 PECRQ9BY49 303 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 SAV1Q9H4B6 383 aaPredicted RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 CARHSP1Q9Y2V2 147 aaKnown RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 ZNF726A6NNF4 738 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 RRP8O43159 456 aaKnown RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 RPL35P42766 123 aaKnown RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 TAS2R46P59540 309 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 UBE2V2Q15819 145 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 FAM209BQ5JX69 171 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 PHYHD1Q5SRE7 291 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 ZNF283Q8N7M2 679 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 ROBO4Q8WZ75 1007 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 OR10C1Q96KK4 312 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 C2orf50Q96LR7 162 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 SLC5A7Q9GZV3 580 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 NELFAQ9H3P2 528 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 C19orf25Q9UFG5 118 aaPredicted RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 RARRES3Q9UL19 164 aa9.37□□□□□ -0.91
ABCF1-202ENST00000376545 NCOA6Q14686 2063 aaPredicted RBP9.37□□□□□ -0.91
ABCF1-202ENST00000376545 PMS2P1A4D2B8 440 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 MSGN1A6NI15 193 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 SERPINE3A8MV23 424 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 ADAP1O75689 374 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 DHRS3O75911 302 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 ACTL6AO96019 429 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 NR2C1P13056 603 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 TMEM176BQ3YBM2 270 aaPredicted RBP9.36□□□□□ -0.91
ABCF1-202ENST00000376545 CHST5Q9GZS9 411 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 OR5AC2Q9NZP5 309 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 PCDHGA1Q9Y5H4 931 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 CSTBP04080 98 aaKnown RBP9.36□□□□□ -0.91
ABCF1-202ENST00000376545 HPNP05981 417 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 MSR1P21757 451 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 DHPSP49366 369 aaPredicted RBP9.36□□□□□ -0.91
ABCF1-202ENST00000376545 DEFA5Q01523 94 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 PCOLCEQ15113 449 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 RTL6Q6ICC9 239 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 GUSBP11Q6P575 273 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 COMMD2Q86X83 199 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 LURAP1LQ8IV03 231 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 TMEM123Q8N131 208 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 BHLHE23Q8NDY6 225 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 GJC3Q8NFK1 279 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 OR51T1Q8NGJ9 327 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 PP6455Q8WZ26 134 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 HAS2Q92819 552 aa9.36□□□□□ -0.91
ABCF1-202ENST00000376545 EMG1Q92979 244 aaKnown RBP9.36□□□□□ -0.91
ABCF1-202ENST00000376545 CRB3Q9BUF7 120 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms