RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 PATE4P0C8F1 98 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 TMPPEQ6ZT21 453 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 AAED1Q7RTV5 226 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 SLC36A1Q7Z2H8 476 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 ZNF611Q8N823 705 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 CCDC54Q8NEL0 328 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 OR10G3Q8NGC4 313 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 ST8SIA1Q92185 356 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 ZNF426Q9BUY5 554 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 MAGT1Q9H0U3 335 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 CNOT1A5YKK6 2376 aaKnown RBP13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 A6NLC8 198 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 ABCD4O14678 606 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 ZNHIT1O43257 154 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 ALDH3B1P43353 468 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 RRADP55042 308 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 MICBQ29980 383 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 SLC30A7Q8NEW0 376 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 REEP6Q96HR9 211 aa13.16□□□□□ -0.3
UBQLN1-202ENST00000376395 SIGLEC6O43699 453 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 GP1BAP07359 652 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 RCC1P18754 421 aaPredicted RBP13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 PIGPP57054 158 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 NKX6-1P78426 367 aaPredicted RBP13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 CLEC18BQ6UXF7 455 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 OR13C8Q8NGS7 320 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 SNIP1Q8TAD8 396 aaKnown RBP13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 EMG1Q92979 244 aaKnown RBP13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 TNFSF18Q9UNG2 199 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 JTBO76095 146 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 DUS4LO95620 317 aaKnown RBP13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 IGHV4-34P06331 123 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 ID4P47928 161 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 SLC22A25Q6T423 547 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 SLC38A9Q8NBW4 561 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 DENND4CQ5VZ89 1909 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 UMAD1C9J7I0 102 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 HIST1H1DP16402 221 aaKnown RBP13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 MSR1P21757 451 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 HAGHQ16775 308 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 OPN5Q6U736 354 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 SLC16A13Q7RTY0 426 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 NAA40Q86UY6 237 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 ZNF100Q8IYN0 542 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 ZDHHC22Q8N966 263 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 ZNF709Q8N972 641 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 DTWD2Q8NBA8 298 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 SFT2D1Q8WV19 159 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 HAS2Q92819 552 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 MESP1Q9BRJ9 268 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 SOX7Q9BT81 388 aa13.15□□□□□ -0.3
UBQLN1-202ENST00000376395 NSG1A0A0A6YYJ2 146 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 OR6C76A6NM76 312 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 RNASEK-C17orf49H0YIS7 233 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 ST8SIA3O43173 380 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 GSTP1P09211 210 aaKnown RBP13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 ICAM2P13598 275 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 CTRB1P17538 263 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 SCAND1P57086 179 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 GRB2P62993 217 aaKnown RBP13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 ISXQ2M1V0 245 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 NDRG3Q9UGV2 375 aa13.15□□□□□ -0.31
UBQLN1-202ENST00000376395 DOCK7Q96N67 2140 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 SYNGR4O95473 234 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 NDUFA6P56556 154 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 YRDCQ86U90 279 aaKnown RBP13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 ARRDC1Q8N5I2 433 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 OR2G3Q8NGZ4 309 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 GNRHR2Q96P88 292 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 ABI3Q9P2A4 366 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 TRBV5-7A0A0A0MS05 114 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 MSTNO14793 375 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 HPP00738 406 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 HOXC12P31275 282 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 IDH3GP51553 393 aaPredicted RBP13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 SEMA6DQ8NFY4 1073 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 MCHR2Q969V1 340 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 TLNRD1Q9H1K6 362 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 SMCO3A2RU48 225 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 C2CD4DB7Z1M9 353 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 TBPP20226 339 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 GDF1P27539 372 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 CCR5P51681 352 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 PJVKQ0ZLH3 352 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 KISS1Q15726 138 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 LGI3Q8N145 548 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 PLPP5Q8NEB5 264 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 FLVCR1-AS1Q8TAF5 88 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 MVB12AQ96EY5 273 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 HDHD3Q9BSH5 251 aaPredicted RBP13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 RSRP1Q9BUV0 290 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 AMDHD2Q9Y303 409 aa13.14□□□□□ -0.31
UBQLN1-202ENST00000376395 EPOPA6NHQ4 379 aa13.13□□□□□ -0.31
UBQLN1-202ENST00000376395 CD37P11049 281 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms