RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 TPPPO94811 219 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 NKX2-1P43699 371 aaPredicted RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF266Q14584 549 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 PCK2Q16822 640 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 SLC16A13Q7RTY0 426 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 VSTM2LQ96N03 204 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 MOB1AQ9H8S9 216 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 CYB5R1Q9UHQ9 305 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 SPTY2D1-AS1A0A0U1RR47 76 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 TRIM77I1YAP6 450 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 GPR137BO60478 399 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 SFT2D2O95562 160 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 EIF1P41567 113 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 TLE1Q04724 770 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 HYAL1Q12794 435 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 ALKBH6Q3KRA9 238 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 ATG4DQ86TL0 474 aaPredicted RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 MAML2Q8IZL2 1156 aaPredicted RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 OR1N1Q8NGS0 311 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 CPT1CQ8TCG5 803 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 MRPS18AQ9NVS2 196 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 GPR160Q9UJ42 338 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 LOC101059948A0A1B0GTJ6 334 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 HSPB2A8KAH6 182 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 ADAP1O75689 374 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 RCC1P18754 421 aaPredicted RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 RBP2P50120 134 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 HSPB2Q16082 182 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 MOGAT2Q3SYC2 334 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 SPATA46Q5T0L3 261 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 C1orf87Q8N0U7 546 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 SLC39A9Q9NUM3 307 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 SHISA3A0PJX4 238 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 A6NCN8 305 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 CHRM2P08172 466 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 RAB13P51153 203 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 RRADP55042 308 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 RPS4XP62701 263 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 OR56B2PQ8NGI1 322 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 SCMH1Q96GD3 660 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 FAAP24Q9BTP7 215 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 TDRD6O60522 2096 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 NUDT19A8MXV4 375 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 THY1P04216 161 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 HIST1H1DP16402 221 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 BMP5P22003 454 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 CXCL12P48061 93 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 RPP30P78346 268 aaKnown RBP5.84□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM128Q5BJH2 165 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 IL34Q6ZMJ4 242 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 OR11G2Q8NGC1 345 aa5.84□□□□□ -1.47
SMC1A-202ENST00000375340 UBE2L5PA0A1B0GUS4 154 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 ZNHIT1O43257 154 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 TIMM8AO60220 97 aaPredicted RBP5.84□□□□□ -1.48
SMC1A-202ENST00000375340 JTBO76095 146 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 ABHD16AO95870 558 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 OR5H8P0DN80 308 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 HLA-DOBP13765 273 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 UQCC3Q6UW78 93 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 ANKRD37Q7Z713 158 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 ST8SIA1Q92185 356 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 FAM103A1Q9BTL3 118 aaKnown RBP5.84□□□□□ -1.48
SMC1A-202ENST00000375340 SLC17A5Q9NRA2 495 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 DNAJB11Q9UBS4 358 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 OPN4Q9UHM6 478 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 SF3B6Q9Y3B4 125 aaKnown RBP5.84□□□□□ -1.48
SMC1A-202ENST00000375340 FRMPD3Q5JV73 1810 aa5.84□□□□□ -1.48
SMC1A-202ENST00000375340 HMSDA8MTL9 139 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 AQP7O14520 342 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 NXPH2O95156 264 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 DAOP14920 347 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 CPN1P15169 458 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 TGFBR3Q03167 851 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 INPP5JQ15735 1006 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 THNSL2Q86YJ6 484 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 GPX8Q8TED1 209 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ALKBH3Q96Q83 286 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 NPAS1Q99742 590 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 SAMD10Q9BYL1 202 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 KCNE5Q9UJ90 142 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 PNLIPRP2P54317 469 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF705AQ6ZN79 300 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 SSX9Q7RTT3 188 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ZDHHC22Q8N966 263 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF485Q8NCK3 441 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 OR8B12Q8NGG6 310 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 OR4F5Q8NH21 305 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 MCHR2Q969V1 340 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 OR4F4Q96R69 305 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF275Q9NSD4 429 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-202ENST00000375340 A0A1W2PPV4 95 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 E5RGE8 158 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 EFSO43281 561 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 CCL2P13500 99 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 GCH1P30793 250 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 IL2RGP31785 369 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 EDDM3AQ14507 147 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 TFAP2EQ6VUC0 442 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 UBALD1Q8TB05 177 aa5.83□□□□□ -1.48
SMC1A-202ENST00000375340 THOC3Q96J01 351 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms