RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 SERGEFQ9UGK8 458 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 STRAPQ9Y3F4 350 aaKnown RBP18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 GEMIN2O14893 280 aaKnown RBP18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 GLIPR1P48060 266 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 AADACL3Q5VUY0 350 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 C1QL3Q5VWW1 255 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 VITQ6UXI7 678 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 TMEM182Q6ZP80 229 aaPredicted RBP18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 ZNF429Q86V71 674 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 FAM210BQ96KR6 192 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 HHLA2Q9UM44 414 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 REV3LO60673 3130 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 BORCS7-ASMTA0A0B4J1R7 106 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 RBFOX3A6NFN3 312 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 SDCBPO00560 298 aaPredicted RBP18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 KNG1P01042 644 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 CMPK1P30085 196 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 RGS19P49795 217 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 DGAT2L6Q6ZPD8 337 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 COX15Q7KZN9 410 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 OR52N4Q8NGI2 321 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 LOC107986453A0A1B0GWG9 222 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 CSTAP01040 98 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 EDN3P14138 238 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 PPA1Q15181 289 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 SLC18B1Q6NT16 456 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 THOC3Q96J01 351 aaKnown RBP18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 SERINC2Q96SA4 455 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 ACTR3CQ9C0K3 210 aaPredicted RBP18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 THAP10Q9P2Z0 257 aaPredicted RBP18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 FOXD3Q9UJU5 478 aaPredicted RBP18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 EMC9Q9Y3B6 208 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 GOLT1BQ9Y3E0 138 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 LRP12Q9Y561 859 aa18.22■□□□□ 0.51
TMEFF1-201ENST00000374879 B3GALT2O43825 422 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 AMBPP02760 352 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 P2RY1P47900 373 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 PDGFRLQ15198 375 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 PLXDC2Q6UX71 529 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 LFNGQ8NES3 379 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 MMP25Q9NPA2 562 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 SLC5A6Q9Y289 635 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 GPR89AB7ZAQ6 455 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 KAT7O95251 611 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 GPR89BP0CG08 455 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 INSM1Q01101 510 aaPredicted RBP18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 CST6Q15828 149 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 R3HDM4Q96D70 268 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 PHPT1Q9NRX4 125 aaPredicted RBP18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 RFNGQ9Y644 331 aa18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 SPTBN5Q9NRC6 3674 aaKnown RBP18.21■□□□□ 0.51
TMEFF1-201ENST00000374879 METTL12A8MUP2 240 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 SRP19P09132 144 aaKnown RBP18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 NPSP0C0P6 89 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 ASAH2BP0C7U1 165 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 RND3P61587 244 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 ZP2Q05996 745 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 PRR18Q8N4B5 295 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 NKAIN3Q8N8D7 197 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 RNASEH2CQ8TDP1 164 aaKnown RBP18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 SCGB3A2Q96PL1 93 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 RAB11FIP5Q9BXF6 653 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 MRPL22Q9NWU5 206 aaKnown RBP18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 PITPNC1Q9UKF7 332 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 KIAA0100Q14667 2235 aaKnown RBP18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 LOC101059948A0A1B0GTJ6 334 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 A0A1W2PP55 124 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 FIGNL2A6NMB9 653 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 PRSS41Q7RTY9 318 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 GALNTL5Q7Z4T8 443 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 OR5H2Q8NGV7 314 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 FNDC9Q8TBE3 224 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 METTL21AQ8WXB1 218 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 C8orf44Q96CB5 159 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 TMEM208Q9BTX3 173 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 GPR87Q9BY21 358 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 OPN3Q9H1Y3 402 aaPredicted RBP18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 SMDT1Q9H4I9 107 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 PLEKHA2Q9HB19 425 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 LRIT1Q9P2V4 623 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 TUBD1Q9UJT1 453 aa18.2■□□□□ 0.5
TMEFF1-201ENST00000374879 A0A0A6YYD4 124 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 LINC01553A4QN01 128 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 MDKP21741 143 aaPredicted RBP18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 PTGER4P35408 488 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 EMP2P54851 167 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 ROM1Q03395 351 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 ENPP2Q13822 863 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 NNATQ16517 81 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 EMC4Q5J8M3 183 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 PLAC9Q5JTB6 97 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 LHFPL1Q86WI0 220 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 PLPP5Q8NEB5 264 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 OR4C3Q8NH37 302 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 TVP23CQ96ET8 276 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 OR2M4Q96R27 311 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 K7N7A8 449 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 DLEU1O43261 78 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 OR6A2O95222 327 aa18.19■□□□□ 0.5
TMEFF1-201ENST00000374879 DCXRQ7Z4W1 244 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms