RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MS4A18Q3C1V0 323 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ZNF766Q5HY98 468 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 STPG1Q5TH74 334 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 METTL11BQ5VVY1 283 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 LYSMD4Q5XG99 296 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 PMS2CLQ68D20 193 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ASPHD2Q6ICH7 369 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ZNF704Q6ZNC4 412 aaPredicted RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 C18orf65Q6ZTR6 163 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 CPEB2Q7Z5Q1 589 aaKnown RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 LUZP2Q86TE4 346 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 SPICQ8N5J4 248 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ZNF248Q8NDW4 579 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 DNAAF1Q8NEP3 725 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 OR11G2Q8NGC1 345 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 OR51A4Q8NGJ6 313 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 OR6M1Q8NGM8 313 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 SPATA3Q8NHX4 192 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 CEP76Q8TAP6 659 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ST7LQ8TDW4 575 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 SAP25Q8TEE9 199 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ATOH1Q92858 354 aaPredicted RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 NAT6Q93015 286 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 PHF21AQ96BD5 680 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 DDIT4LQ96D03 193 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 NXPE2Q96DL1 559 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 MED30Q96HR3 178 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 GPR137Q96N19 417 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 OR6C1Q96RD1 312 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 ABHD6Q9BV23 337 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 SLC7A5P2Q9GIP4 190 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 OR11A1Q9GZK7 315 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 WDR54Q9H977 334 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 MAP6D1Q9H9H5 199 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 PRMT8Q9NR22 394 aaPredicted RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 SDHAF3Q9NRP4 125 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 TAS2R8Q9NYW2 309 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 CKLFQ9UBR5 152 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 MTFP1Q9UDX5 166 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 C19orf25Q9UFG5 118 aaPredicted RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 SCP2D1Q9UJQ7 156 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 HHLA2Q9UM44 414 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 NPIPA1Q9UND3 350 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 DHDHQ9UQ10 334 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 B3GALT5Q9Y2C3 310 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 HSPB11Q9Y547 144 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 U3KQA8 63 aa4.19□□□□□ -1.74
USP48-202ENST00000374730 COL27A1Q8IZC6 1860 aaPredicted RBP4.19□□□□□ -1.74
USP48-202ENST00000374730 USP34Q70CQ2 3546 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SDK1Q7Z5N4 2213 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 PIEZO1Q92508 2521 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 LOC102723996A0A087X1L8 192 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 IGHV5-10-1A0A0J9YXX1 117 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 LOC107986453A0A1B0GWG9 222 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 LOC390937A0A1W2PQ73 354 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 FAM90A7PA6NKC0 464 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SH2D7A6NKC9 451 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 FAM90A22PA8MWA6 464 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 FAM90A12PA8MX19 464 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 A8MXE2 369 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 FAM90A23PA8MXZ1 464 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 PRSS44E7EML9 344 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SMLR1H3BR10 107 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 LDLRAD4O15165 306 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SSNA1O43805 119 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 GMFGO60234 142 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 RBBP9O75884 186 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 SNAPC5O75971 98 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 NEURL1O76050 574 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 PNPP00491 289 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 MAS1P04201 325 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ALDOBP05062 364 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 TPOP07202 933 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 MELTFP08582 738 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 GIPP09681 153 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 UBCP0CG48 685 aaKnown RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 FGF5P12034 268 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 HLA-DOBP13765 273 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 GABRA1P14867 456 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ZNF823P16415 610 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 CXCL3P19876 107 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 FKBP2P26885 142 aaKnown RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 PTGDSP41222 190 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 POU3F4P49335 361 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 VEGFCP49767 419 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ZNF41P51814 821 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 GNG2P59768 71 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ACTBP60709 375 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ACTG1P63261 375 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 CCL7P80098 99 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 DHODHQ02127 395 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 POU3F1Q03052 451 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 MFGE8Q08431 387 aaPredicted RBP4.18□□□□□ -1.74
USP48-202ENST00000374730 CAMK2DQ13557 499 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 OR7A5Q15622 319 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 LINC00303Q3SY05 128 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 ZNF585BQ52M93 769 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 TMEM255AQ5JRV8 349 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 Q5PR19 223 aa4.18□□□□□ -1.74
USP48-202ENST00000374730 C1orf100Q5SVJ3 147 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms