RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 GRAMD2BQ96HH9 432 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 ADGRL4Q9HBW9 690 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 MDH2P40926 338 aaKnown RBP10.37□□□□□ -0.75
VCL-202ENST00000372755 TRA2AQ13595 282 aaKnown RBP eCLIP10.37□□□□□ -0.75
VCL-202ENST00000372755 MICBQ29980 383 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 GPR119Q8TDV5 335 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 NTNG2Q96CW9 530 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 OR8B4Q96RC9 309 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 TOX3O15405 576 aaPredicted RBP10.37□□□□□ -0.75
VCL-202ENST00000372755 SPATA46Q5T0L3 261 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 Q6ZNB5 142 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 TEX50A0A1B0GTY4 177 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 METTL12A8MUP2 240 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 USF1P22415 310 aaPredicted RBP10.37□□□□□ -0.75
VCL-202ENST00000372755 MOGAT2Q3SYC2 334 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 OR2Z1Q8NG97 314 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 ZNF230Q9UIE0 474 aaPredicted RBP10.37□□□□□ -0.75
VCL-202ENST00000372755 LRP12Q9Y561 859 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 MYH10P35580 1976 aa10.37□□□□□ -0.75
VCL-202ENST00000372755 LMO7DNF2Z398 122 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 RAB7AP51149 207 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 ALKBH3Q96Q83 286 aaPredicted RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 UQCC1Q9NVA1 299 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 ASB1Q9Y576 335 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 FGF2P09038 288 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 CDAP32320 146 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 HNRNPA3P51991 378 aaKnown RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 UQCC3Q6UW78 93 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 ING1Q9UK53 422 aaPredicted RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 SPTY2D1-AS1A0A0U1RR47 76 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 EIF3IQ13347 325 aaKnown RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 CNRIP1Q96F85 164 aaPredicted RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 MYH13Q9UKX3 1938 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 B3GALNT1O75752 331 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 SLC25A1P53007 311 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 BTLAQ7Z6A9 289 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 ZDHHC22Q8N966 263 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 RPEQ96AT9 228 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 FKBP11Q9NYL4 201 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 TRAPPC1Q9Y5R8 145 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 SIGLEC1Q9BZZ2 1709 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 COL16A1Q07092 1604 aaPredicted RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 RNASEK-C17orf49H0YIS7 233 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 MMP7P09237 267 aaPredicted RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 ANKRD34CP0C6C1 535 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 ZNF766Q5HY98 468 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 DHRS7BQ6IAN0 325 aaPredicted RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 WDR89Q96FK6 387 aaPredicted RBP10.36□□□□□ -0.75
VCL-202ENST00000372755 RHOFQ9HBH0 211 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 TAAR3PQ9P1P4 343 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 DOT1LQ8TEK3 1739 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 KDM3BQ7LBC6 1761 aa10.36□□□□□ -0.75
VCL-202ENST00000372755 ALG1L2C9J202 215 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 PGA3P0DJD8 388 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 C11orf87Q6NUJ2 197 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 ZNF429Q86V71 674 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 OR10V1Q8NGI7 309 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 SLC45A2Q9UMX9 530 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 AMMECR1Q9Y4X0 333 aaPredicted RBP10.35□□□□□ -0.75
VCL-202ENST00000372755 EPHA2P29317 976 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 TMEM196Q5HYL7 178 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 FBXL6Q8N531 539 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 MASP2O00187 686 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 PRKNO60260 465 aaPredicted RBP10.35□□□□□ -0.75
VCL-202ENST00000372755 ETHE1O95571 254 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 NGFP01138 241 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 HLA-BQ31612 363 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 SLC25A35Q3KQZ1 300 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 SLC16A12Q6ZSM3 486 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 CALHM3Q86XJ0 350 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 LTB4R2Q9NPC1 389 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 TSPAN12O95859 305 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 SEMG1P04279 462 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 ZNF680Q8NEM1 530 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 LRRC61Q9BV99 259 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 OPRK1P41145 380 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 LINC00303Q3SY05 128 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 GLDNQ6ZMI3 551 aaPredicted RBP10.35□□□□□ -0.75
VCL-202ENST00000372755 OR52B4Q8NGK2 314 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 PRRX2Q99811 253 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 VAMP8Q9BV40 100 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 GAL3ST2Q9H3Q3 398 aa10.35□□□□□ -0.75
VCL-202ENST00000372755 NME1P15531 152 aaKnown RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 CEACAM6P40199 344 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 PCBP3P57721 371 aaKnown RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 FOXC1Q12948 553 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 CLEC12BQ2HXU8 276 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 MISP3Q96FF7 219 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 RAB40CQ96S21 281 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 CST4P01036 141 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 MYPOPQ86VE0 399 aaPredicted RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 ZBTB44Q8NCP5 570 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 OR5M9Q8NGP3 310 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 KTI12Q96EK9 354 aaPredicted RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 C2CD4DB7Z1M9 353 aa10.34□□□□□ -0.75
VCL-202ENST00000372755 SLC25A5P05141 298 aaKnown RBP10.34□□□□□ -0.75
VCL-202ENST00000372755 SFTA3P0C7M3 94 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms