RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 RBM24Q9BX46 236 aaKnown RBP12.31□□□□□ -0.44
LDB3-204ENST00000372066 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
LDB3-204ENST00000372066 DLL4Q9NR61 685 aa12.31□□□□□ -0.44
LDB3-204ENST00000372066 LRFN1Q9P244 771 aa12.31□□□□□ -0.44
LDB3-204ENST00000372066 V9GYS6 101 aa12.31□□□□□ -0.44
LDB3-204ENST00000372066 RAB27BO00194 218 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 ZNF780AO75290 641 aaPredicted RBP12.3□□□□□ -0.44
LDB3-204ENST00000372066 DHRS3O75911 302 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 VSIG8P0DPA2 414 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 CXCL3P19876 107 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 GFRA1P56159 465 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 RAP2BP61225 183 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 SCRN3Q0VDG4 424 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 LAMTOR1Q6IAA8 161 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 DRAM2Q6UX65 266 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 AAED1Q7RTV5 226 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 MCEMP1Q8IX19 187 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 PNLDC1Q8NA58 520 aaKnown RBP12.3□□□□□ -0.44
LDB3-204ENST00000372066 BEST4Q8NFU0 473 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 TMEM45BQ96B21 275 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 FAM71F1Q96KD3 344 aaPredicted RBP12.3□□□□□ -0.44
LDB3-204ENST00000372066 SLC2A8Q9NY64 477 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 ZNF391Q9UJN7 358 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 MRPS28Q9Y2Q9 187 aaKnown RBP12.3□□□□□ -0.44
LDB3-204ENST00000372066 BOLA1Q9Y3E2 137 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 HSPB11Q9Y547 144 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 DIDO1Q9BTC0 2240 aaKnown RBP12.3□□□□□ -0.44
LDB3-204ENST00000372066 TRGV8A0A0C4DH27 118 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 ZNF736B4DX44 427 aaPredicted RBP12.3□□□□□ -0.44
LDB3-204ENST00000372066 DISC1C4P0D8 188 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 M0R135 149 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 CYTIPO60759 359 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 CD3DP04234 171 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 C4BPBP20851 252 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 DNASE1P24855 282 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 RAD52P43351 418 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 ALDH3B1P43353 468 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 TDGF1P3P51864 188 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 ZP1P60852 638 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 FOXO1Q12778 655 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 UNC119Q13432 240 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 NRN1LQ496H8 165 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 FAAP20Q6NZ36 180 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 Q6ZTK2 550 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 SLC36A1Q7Z2H8 476 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 ANGPTL5Q86XS5 388 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
LDB3-204ENST00000372066 OR10D3Q8NH80 312 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 LILRB4Q8NHJ6 448 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 CPNE2Q96FN4 548 aaPredicted RBP12.3□□□□□ -0.44
LDB3-204ENST00000372066 ZNF799Q96GE5 643 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 GPR137Q96N19 417 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 OR10A2Q9H208 303 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 DEPPQ9NTK1 212 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 TMEM38BQ9NVV0 291 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 MGAT4CQ9UBM8 478 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 ZNF69Q9UC07 566 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 MGAT4AQ9UM21 535 aa12.3□□□□□ -0.44
LDB3-204ENST00000372066 SMLR1H3BR10 107 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 CXCL13O43927 109 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 TRAPPC6AO75865 159 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 CRYABP02511 175 aaKnown RBP12.29□□□□□ -0.44
LDB3-204ENST00000372066 HPNP05981 417 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 HCKP08631 526 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 GSTP1P09211 210 aaKnown RBP12.29□□□□□ -0.44
LDB3-204ENST00000372066 SLC2A1P11166 492 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 ABOP16442 354 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 PCBD1P61457 104 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 Q5BKY6 102 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 WIPI1Q5MNZ9 446 aaPredicted RBP12.29□□□□□ -0.44
LDB3-204ENST00000372066 ACBD4Q8NC06 268 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 OR2M7Q8NG81 312 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 OR51S1Q8NGJ8 323 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 OR10R2Q8NGX6 335 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 PRRT1Q99946 306 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 SEC22CQ9BRL7 303 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 URM1Q9BTM9 101 aaKnown RBP12.29□□□□□ -0.44
LDB3-204ENST00000372066 BEX1Q9HBH7 125 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 PLEK2Q9NYT0 353 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 ZNF319Q9P2F9 582 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 MED12Q93074 2177 aa12.29□□□□□ -0.44
LDB3-204ENST00000372066 IGKV3D-15A0A087WSY6 115 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 CCL21O00585 134 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 SGCEO43556 437 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 OR2A4O95047 310 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 RFPL3SP0C7P2 107 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 ANXA7P20073 488 aaKnown RBP12.28□□□□□ -0.44
LDB3-204ENST00000372066 CRYGSP22914 178 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 GRNP28799 593 aaKnown RBP12.28□□□□□ -0.44
LDB3-204ENST00000372066 CD96P40200 585 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 SLC6A9P48067 706 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 DHODHQ02127 395 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 ARL6IP1Q15041 203 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 MPPED2Q15777 294 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 PNLIPRP3Q17RR3 467 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 ZNF101Q8IZC7 436 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 ITLN2Q8WWU7 325 aaPredicted RBP12.28□□□□□ -0.44
LDB3-204ENST00000372066 OR2A7Q96R45 310 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms