RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 DNASE2O00115 360 aaPredicted RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 CPT2P23786 658 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 OTX1P32242 354 aaPredicted RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 CSNK2A1P68400 391 aaPredicted RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 ENDOGQ14249 297 aaKnown RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 GFOD2Q3B7J2 385 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 CSNK2A3Q8NEV1 391 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 RNF141Q8WVD5 230 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 NAT6Q93015 286 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 LYZL4Q96KX0 146 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 C2orf50Q96LR7 162 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 AQP10Q96PS8 301 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 CHST5Q9GZS9 411 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 SLC6A15Q9H2J7 730 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 PRELID1Q9Y255 219 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 MEMO1Q9Y316 297 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 A0A1W2PP11 408 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 RRP8O43159 456 aaKnown RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 MTRF1O75570 445 aaKnown RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 CD79AP11912 226 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 FGF5P12034 268 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 SNU13P55769 128 aaKnown RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 EIF5AP63241 154 aaKnown RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 SUPT4H1P63272 117 aaKnown RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 AIMP2Q13155 320 aaKnown RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 EXT1Q16394 746 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 AADACL3Q5VUY0 350 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 LCN10Q6JVE6 187 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 DRAM2Q6UX65 266 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 OR1S2Q8NGQ3 325 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 ARL11Q969Q4 196 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 NTNG2Q96CW9 530 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 PECRQ9BY49 303 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 ANGPTL4Q9BY76 406 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 NKX6-2Q9C056 277 aaPredicted RBP12.56□□□□□ -0.4
CD48-201ENST00000368045 CYTL1Q9NRR1 136 aa12.56□□□□□ -0.4
CD48-201ENST00000368045 TMEM218A2RU14 115 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 DHRS7CA6NNS2 312 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 H0YIZ8 118 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 ABCD4O14678 606 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 DHHO43323 396 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 HPNP05981 417 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 BLVRBP30043 206 aaPredicted RBP12.55□□□□□ -0.4
CD48-201ENST00000368045 DHPSP49366 369 aaPredicted RBP12.55□□□□□ -0.4
CD48-201ENST00000368045 ZNF84P51523 738 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 SUCLG1P53597 346 aaKnown RBP12.55□□□□□ -0.4
CD48-201ENST00000368045 DSCR4P56555 118 aaPredicted RBP12.55□□□□□ -0.4
CD48-201ENST00000368045 DEFA5Q01523 94 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 IL11RAQ14626 422 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 SLC9A3R2Q15599 337 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 CRIP3Q6Q6R5 217 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 ATRAIDQ6UW56 229 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 UNQ6126/PRO20091Q6UXV3 157 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 TMEM123Q8N131 208 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 ZSCAN4Q8NAM6 433 aaPredicted RBP12.55□□□□□ -0.4
CD48-201ENST00000368045 POC1AQ8NBT0 407 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 SAP25Q8TEE9 199 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 HAS2Q92819 552 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 NABP1Q96AH0 204 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 S100A13Q99584 98 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 ZNF700Q9H0M5 742 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 PCDHGA1Q9Y5H4 931 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
CD48-201ENST00000368045 NPIPA2E9PIF3 369 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 NPIPA3F8WFD2 350 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 TAAR5O14804 337 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 SIGLEC6O43699 453 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 ATG12O94817 140 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 LIFP15018 202 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 RPS2P15880 293 aaKnown RBP12.54□□□□□ -0.4
CD48-201ENST00000368045 KLK2P20151 261 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 ANOS1P23352 680 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 ZNF169Q14929 603 aaPredicted RBP12.54□□□□□ -0.4
CD48-201ENST00000368045 ANKRD55Q3KP44 614 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 CHRFAM7AQ494W8 412 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 PRAMEF20Q5VT98 475 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 LYSMD4Q5XG99 296 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 CLRN3Q8NCR9 226 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 SPTSSAQ969W0 71 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
CD48-201ENST00000368045 CPNE2Q96FN4 548 aaPredicted RBP12.54□□□□□ -0.4
CD48-201ENST00000368045 NARS2Q96I59 477 aaKnown RBP12.54□□□□□ -0.4
CD48-201ENST00000368045 ST6GALNAC5Q9BVH7 336 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 EHFQ9NZC4 300 aa12.54□□□□□ -0.4
CD48-201ENST00000368045 C14orf166Q9Y224 244 aaKnown RBP12.54□□□□□ -0.4
CD48-201ENST00000368045 SPTBN5Q9NRC6 3674 aaKnown RBP12.54□□□□□ -0.4
CD48-201ENST00000368045 E9PLN8 166 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 STMND1H3BQB6 276 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 DNPH1O43598 174 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 FCGR2AP12318 317 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 IL15RAQ13261 267 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 PABPC1L2AQ5JQF8 200 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 NKAPLQ5M9Q1 402 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 IL34Q6ZMJ4 242 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 SVBPQ8N300 66 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 OR9K2Q8NGE7 335 aa12.53□□□□□ -0.4
CD48-201ENST00000368045 M1APQ8TC57 530 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms