RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 HIVEP3Q5T1R4 2406 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 A0A0U1RQV5 110 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 SMIM30A4D0T7 59 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 F5H5K5 113 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 NCR1O76036 304 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 FSTP19883 344 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 CCL1P22362 96 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 TIMP3P35625 211 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 TGFBR3Q03167 851 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 C1orf185Q5T7R7 199 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 DDI2Q5TDH0 399 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 STAC2Q6ZMT1 411 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 SEM1Q6ZVN7 128 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 HSD17B13Q7Z5P4 300 aaPredicted RBP10.51□□□□□ -0.73
USF1-203ENST00000368021 CNEP1R1Q8N9A8 125 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 OR1K1Q8NGR3 316 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 FGFBP3Q8TAT2 258 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 BOD1Q96IK1 185 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 SDHCQ99643 169 aaPredicted RBP10.51□□□□□ -0.73
USF1-203ENST00000368021 ZNF436Q9C0F3 470 aaPredicted RBP10.51□□□□□ -0.73
USF1-203ENST00000368021 SRRQ9GZT4 340 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 PLSCR4Q9NRQ2 329 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 EXTL2Q9UBQ6 330 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 SLC23A1Q9UHI7 598 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 FOXJ3Q9UPW0 622 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 FAM215AQ9Y5M1 114 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 LRRK2Q5S007 2527 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 USP9XQ93008 2570 aaPredicted RBP10.51□□□□□ -0.73
USF1-203ENST00000368021 ADGRG4Q8IZF6 3080 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 A0A096LPE4 126 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 A0A1W2PPZ6 126 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 P2RY10O00398 339 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 SYT7O43581 403 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 TNFSF13O75888 250 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 IGLV3-1P01715 115 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 ANXA2P07355 339 aaKnown RBP10.51□□□□□ -0.73
USF1-203ENST00000368021 COX5BP10606 129 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 ABOP16442 354 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 ARR3P36575 388 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 MAP2K3P46734 347 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 HTR5AP47898 357 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 SLC6A9P48067 706 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 OR10A3P58181 314 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 BTN1A1Q13410 526 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 TATDN3Q17R31 274 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 C4orf46Q504U0 113 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 LAMTOR1Q6IAA8 161 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 MZT2AQ6P582 158 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 C19orf18Q8NEA5 215 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 OR13C3Q8NGS6 347 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 MARVELD1Q9BSK0 173 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 ZNF275Q9NSD4 429 aaPredicted RBP10.51□□□□□ -0.73
USF1-203ENST00000368021 COA4Q9NYJ1 87 aa10.51□□□□□ -0.73
USF1-203ENST00000368021 DIDO1Q9BTC0 2240 aaKnown RBP10.5□□□□□ -0.73
USF1-203ENST00000368021 A0A1B0GTI1 187 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 RPS10-NUDT3A0A1W2PQS6 291 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 UBL3O95164 117 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 IL2RAP01589 272 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 PATE4P0C8F1 98 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 SLC2A1P11166 492 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 EPXP11678 715 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 ANXA3P12429 323 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 APEX1P27695 318 aaKnown RBP10.5□□□□□ -0.73
USF1-203ENST00000368021 TNFSF8P32971 234 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 THBS2P35442 1172 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 ZNF124Q15973 351 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 PABPC1L2AQ5JQF8 200 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 C3P1Q6ZMU1 363 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 FAM57BQ71RH2 274 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 LRRTM1Q86UE6 522 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 STPG2Q8N412 459 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 CCDC54Q8NEL0 328 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 OR1M1Q8NGA1 313 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 AKR7LQ8NHP1 331 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 OR51E1Q8TCB6 317 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 NANOS1Q8WY41 292 aaKnown RBP10.5□□□□□ -0.73
USF1-203ENST00000368021 BCL2L2Q92843 193 aaPredicted RBP10.5□□□□□ -0.73
USF1-203ENST00000368021 ORAI1Q96D31 301 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 CKLFQ9UBR5 152 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 AK6Q9Y3D8 172 aaKnown RBP10.5□□□□□ -0.73
USF1-203ENST00000368021 CMAHPQ9Y471 501 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 V9GY05 133 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 MYO7BQ6PIF6 2116 aa10.5□□□□□ -0.73
USF1-203ENST00000368021 TRAV8-7A0A075B6U6 113 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 TRGV8A0A0C4DH27 118 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 AIPO00170 330 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 PRRG2O14669 202 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 SLC19A2O60779 497 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 TOXO94900 526 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 CGAP01215 116 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 DBHP09172 617 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 IGFBP3P17936 291 aaPredicted RBP10.49□□□□□ -0.73
USF1-203ENST00000368021 COX5AP20674 150 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 CFPP27918 469 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 VEGFCP49767 419 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 PPP3R1P63098 170 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 FGL1Q08830 312 aa10.49□□□□□ -0.73
USF1-203ENST00000368021 FOXF2Q12947 444 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms