RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 C14orf28Q4W4Y0 310 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMEM240Q5SV17 173 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST2H3AQ71DI3 136 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC25A42Q86VD7 318 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF610Q8N9Z0 462 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 NAXEQ8NCW5 288 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF248Q8NDW4 579 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR4K15Q8NH41 348 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR52N5Q8NH56 324 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 MITD1Q8WV92 249 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 RRNAD1Q96FB5 475 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLCO5A1Q9H2Y9 848 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 LMAN1LQ9HAT1 526 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 TRAV36DV7A0A075B6V5 113 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 ELOA3CA0A087WX78 387 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 METTL12A8MUP2 240 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 RAB27BO00194 218 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SDCBPO00560 298 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SYT7O43581 403 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 KNG1P01042 644 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 FUT7Q11130 342 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC10A1Q14973 349 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 EBPQ15125 230 aaKnown RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF674Q2M3X9 581 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 GFI1BQ5VTD9 330 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF529Q6P280 563 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 HEPN1Q6WQI6 88 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 C16orf47Q6ZP98 133 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 C7orf61Q8IZ16 206 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC22A18ASQ8N1D0 253 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST3H2BBQ8N257 126 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 DEFB119Q8N690 84 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR5D18Q8NGL1 313 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 THRSPQ92748 146 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 C5orf34Q96MH7 638 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 ST6GALNAC5Q9BVH7 336 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SMIM3Q9BZL3 60 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 FOXQ1Q9C009 403 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC17A5Q9NRA2 495 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 FAM212BQ9NTI7 297 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR14J1Q9UGF5 321 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 MEGF11A6BM72 1044 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 PRSS47A8MTI9 375 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 H3BML4 177 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 M0R143 59 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR2C1O95371 312 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SOD3P08294 240 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 FCGR3AP08637 254 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 MPZP25189 248 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 CD1CP29017 333 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 IL2RGP31785 369 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 ID4P47928 161 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 EMP2P54851 167 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SSBP1Q04837 148 aaKnown RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 PLCXD2Q0VAA5 305 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 GAGE1Q13065 139 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 ARFRP1Q13795 201 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 RHEBQ15382 184 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 MAJINQ3KP22 176 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 C1orf53Q5VUE5 145 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 PTCRAQ6ISU1 281 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 FAM166AQ6J272 317 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 RNF144BQ7Z419 303 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 CATSPERDQ86XM0 798 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 PNLDC1Q8NA58 520 aaKnown RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZSCAN4Q8NAM6 433 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR51F2Q8NH61 342 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 NPRL2Q8WTW4 380 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 HOXB13Q92826 284 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 PACRGQ96M98 296 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 GPER1Q99527 375 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SNHG12Q9BXW3 62 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 SPACA1Q9HBV2 294 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 IL17BQ9UHF5 180 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 VDAC3Q9Y277 283 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 POMT1Q9Y6A1 747 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 FANCMQ8IYD8 2048 aa7.32□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMED7-TICAM2A0A0A6YYA0 188 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 TEX13DA0A0J9YY54 714 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 A0A1B0GV50 99 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 A0A1W2PP11 408 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 TCRBV21S2A2A0A5A6 115 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMEM150CB9EJG8 249 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 EFSO43281 561 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 AHSA1O95433 338 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 QDPRP09417 244 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 DHPSP49366 369 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 GFERP55789 205 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 POU3F1Q03052 451 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 DMRTA1Q5VZB9 504 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 LCN10Q6JVE6 187 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 PTPMT1Q8WUK0 201 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 MRGPRFQ96AM1 343 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 MVB12AQ96EY5 273 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 SMIM8Q96KF7 97 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 NCOR1P1Q9H4R4 102 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR5AC2Q9NZP5 309 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 CLDN16Q9Y5I7 305 aa7.31□□□□□ -1.24
CDC42SE1-201ENST00000357235 R4GMQ9 66 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms