RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SLC22A31A6NKX4 558 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 CDIPTO14735 213 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 ADAM20O43506 726 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 ZNF254O75437 659 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DUX4L2P0CJ85 424 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DUX4L3P0CJ86 424 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DUX4L4P0CJ87 422 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DUX4L5P0CJ88 424 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DUX4L6P0CJ89 424 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DUX4L7P0CJ90 424 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 CFPP27918 469 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DCTDP32321 178 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 UBA52P62987 128 aaKnown RBP11.98□□□□□ -0.49
HMGN3-202ENST00000344726 ACTG1P63261 375 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DMRTC1Q5HYR2 192 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DUX4L9Q6RFH8 374 aaPredicted RBP11.98□□□□□ -0.49
HMGN3-202ENST00000344726 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
HMGN3-202ENST00000344726 PLEKHG7Q6ZR37 379 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 KRT74Q7RTS7 529 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 SSX6Q7RTT6 188 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 FGFRL1Q8N441 504 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 GALNT4Q8N4A0 578 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 ASB17Q8WXJ9 295 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 OR5P3Q8WZ94 311 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 PIGCQ92535 297 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 NUDT16L1Q9BRJ7 211 aaKnown RBP11.98□□□□□ -0.49
HMGN3-202ENST00000344726 RNPEPL1Q9HAU8 725 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 GPR84Q9NQS5 396 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 HAO2Q9NYQ3 351 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 H2AFY2Q9P0M6 372 aaPredicted RBP11.98□□□□□ -0.49
HMGN3-202ENST00000344726 DUX4Q9UBX2 424 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 ENOPH1Q9UHY7 261 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 IKZF2Q9UKS7 526 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 NUP50Q9UKX7 468 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 MPC1Q9Y5U8 109 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 TMEM14AQ9Y6G1 99 aa11.98□□□□□ -0.49
HMGN3-202ENST00000344726 ACOD1A6NK06 481 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 TRIM77I1YAP6 450 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 TTRP02766 147 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 PPIAL4GP0DN37 164 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 CFHR2P36980 270 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 COMPP49747 757 aaPredicted RBP11.97□□□□□ -0.49
HMGN3-202ENST00000344726 RIDAP52758 137 aaKnown RBP11.97□□□□□ -0.49
HMGN3-202ENST00000344726 IL5RAQ01344 420 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 KCNJ8Q15842 424 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 FAM76BQ5HYJ3 339 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 BTNL3Q6UXE8 466 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 C12orf54Q6X4T0 127 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 GID4Q8IVV7 300 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 FTMTQ8N4E7 242 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 OR51G2Q8NGK0 314 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 OR51E1Q8TCB6 317 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 RPL3LQ92901 407 aaKnown RBP11.97□□□□□ -0.49
HMGN3-202ENST00000344726 UPRTQ96BW1 309 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 FAM71F1Q96KD3 344 aaPredicted RBP11.97□□□□□ -0.49
HMGN3-202ENST00000344726 TECTBQ96PL2 329 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 DUX5Q96PT3 197 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 MICU1Q9BPX6 476 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 RBM4BQ9BQ04 359 aaKnown RBP11.97□□□□□ -0.49
HMGN3-202ENST00000344726 RTL8AQ9BWD3 113 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 CLN6Q9NWW5 311 aa11.97□□□□□ -0.49
HMGN3-202ENST00000344726 NUFIP1Q9UHK0 495 aaKnown RBP11.97□□□□□ -0.49
HMGN3-202ENST00000344726 MRM2Q9UI43 246 aaKnown RBP11.97□□□□□ -0.49
HMGN3-202ENST00000344726 ZNF816-ZNF321PA0A0X1KG74 233 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 ANXA2P2A6NMY6 339 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 SRRM5B3KS81 715 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 APOL3O95236 402 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 ALPLP05186 524 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 AMY2BP19961 511 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 FPR2P25090 351 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 MAP2K3P46734 347 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 NPY4RP50391 375 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 SNCBQ16143 134 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 ZNF829Q3KNS6 432 aaPredicted RBP11.96□□□□□ -0.49
HMGN3-202ENST00000344726 CEP78Q5JTW2 689 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 DOK3Q7L591 496 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 ZDHHC23Q8IYP9 409 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 SCCPDHQ8NBX0 429 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 FAM81AQ8TBF8 368 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 UBE2FQ969M7 185 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 RNF170Q96K19 258 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 JMJD8Q96S16 334 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 MNTQ99583 582 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 TBX5Q99593 518 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 WDR13Q9H1Z4 485 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 TRIM36Q9NQ86 728 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 ERVK-18Q9QC07 812 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 KAAG1Q9UBP8 84 aa11.96□□□□□ -0.49
HMGN3-202ENST00000344726 WARS2Q9UGM6 360 aaKnown RBP11.96□□□□□ -0.49
HMGN3-202ENST00000344726 TRAV40A0A0B4J280 105 aa11.95□□□□□ -0.5
HMGN3-202ENST00000344726 MDFIC2A0A1B0GVS7 189 aa11.95□□□□□ -0.5
HMGN3-202ENST00000344726 DNAJC9-AS1A6NH13 148 aa11.95□□□□□ -0.5
HMGN3-202ENST00000344726 TMEM210A6NLX4 147 aa11.95□□□□□ -0.5
HMGN3-202ENST00000344726 E9PQ18 207 aa11.95□□□□□ -0.5
HMGN3-202ENST00000344726 ZNF670-ZNF695F2Z2N8 137 aa11.95□□□□□ -0.5
HMGN3-202ENST00000344726 DVL1O14640 695 aa11.95□□□□□ -0.5
HMGN3-202ENST00000344726 EI24O14681 340 aa11.95□□□□□ -0.5
HMGN3-202ENST00000344726 NDUFA2O43678 99 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms