RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SYT13Q7L8C5 426 aa16.24■□□□□ 0.19
SMC4-201ENST00000344722 ZNF764Q96H86 408 aaPredicted RBP16.24■□□□□ 0.19
SMC4-201ENST00000344722 POM121Q96HA1 1249 aa16.24■□□□□ 0.19
SMC4-201ENST00000344722 FGF22Q9HCT0 170 aa16.24■□□□□ 0.19
SMC4-201ENST00000344722 MMP25Q9NPA2 562 aa16.24■□□□□ 0.19
SMC4-201ENST00000344722 SLC52A3Q9NQ40 469 aa16.24■□□□□ 0.19
SMC4-201ENST00000344722 OTPQ5XKR4 325 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 NOL4LQ96MY1 436 aaPredicted RBP16.23■□□□□ 0.19
SMC4-201ENST00000344722 GPANK1O95872 356 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 PTTG1IPP53801 180 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 CHRDL1Q9BU40 450 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 Q9N2K0 584 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 DHCR7Q9UBM7 475 aaKnown RBP16.23■□□□□ 0.19
SMC4-201ENST00000344722 FAM74A7A6NL05 159 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 SLC25A6P12236 298 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 FAM74A3Q4VXF1 159 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 OSR2Q8N2R0 312 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 PP6455Q8WZ26 134 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 ARHGAP5-AS1Q96IT6 56 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 ZNF25P17030 456 aaPredicted RBP16.23■□□□□ 0.19
SMC4-201ENST00000344722 NR0B2Q15466 257 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 BOKQ9UMX3 212 aaPredicted RBP16.23■□□□□ 0.19
SMC4-201ENST00000344722 RPLP1P05386 114 aaKnown RBP16.23■□□□□ 0.19
SMC4-201ENST00000344722 S100A7P31151 101 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 SHBQ15464 509 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 NSUN5P2Q63ZY6 315 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 OR4D11Q8NGI4 311 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 OR5C1Q8NGR4 320 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 MED29Q9NX70 200 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 SLC17A4Q9Y2C5 497 aa16.23■□□□□ 0.19
SMC4-201ENST00000344722 MPTX1A8MV57 137 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 ONECUT2O95948 504 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 TIMP1P01033 207 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 SSR4P51571 173 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 SLC37A1P57057 533 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 NAAAQ02083 359 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 SURF2Q15527 256 aaPredicted RBP16.22■□□□□ 0.19
SMC4-201ENST00000344722 ZNF77Q15935 545 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 SP6Q3SY56 376 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 PRAMEF5Q5TYX0 476 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 PRAMEF6Q5VXH4 476 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 TNFSF4P23510 183 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 PMP22Q01453 160 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 OR2B11Q5JQS5 317 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 ZNF793Q6ZN11 406 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 OR2C3Q8N628 320 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 TMEM104Q8NE00 496 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 RAB33BQ9H082 229 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 ST3GAL6Q9Y274 331 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 CLEC18AA5D8T8 446 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 CHEK1O14757 476 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 NKX2-2O95096 273 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 ZFP36L2P47974 494 aaKnown RBP16.22■□□□□ 0.19
SMC4-201ENST00000344722 GUCA2BQ16661 112 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 PUSL1Q8N0Z8 303 aaKnown RBP16.22■□□□□ 0.19
SMC4-201ENST00000344722 CLEC18CQ8NCF0 446 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 HLA-CQ95604 372 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 NAA60Q9H7X0 242 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 TIMM10BQ9Y5J6 103 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 P2RY1P47900 373 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 CMTM2Q8TAZ6 248 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 RPS4Y2Q8TD47 263 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 ZG16BQ96DA0 208 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 ZBP1Q9H171 429 aa16.22■□□□□ 0.19
SMC4-201ENST00000344722 FRG2CA6NGY1 282 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 ADAP1O75689 374 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 ZNF660Q6AZW8 331 aaPredicted RBP16.21■□□□□ 0.19
SMC4-201ENST00000344722 DEGS2Q6QHC5 323 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 OXGR1Q96P68 337 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 CDCA3Q99618 268 aaPredicted RBP16.21■□□□□ 0.19
SMC4-201ENST00000344722 NRIP2Q9BQI9 281 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 DNAJB12Q9NXW2 375 aaKnown RBP16.21■□□□□ 0.19
SMC4-201ENST00000344722 A0A1W2PPE2 198 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 PLSCR5A0PG75 271 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 HSBP1O75506 76 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 ASCL1P50553 236 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 RAB35Q15286 201 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 C21orf62-AS1Q17RA5 79 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 FAM181AQ8N9Y4 354 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 PITPNC1Q9UKF7 332 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 C4orf47A7E2U8 309 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 WDR1O75083 606 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 CLEC18BQ6UXF7 455 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 KTI12Q96EK9 354 aaPredicted RBP16.21■□□□□ 0.19
SMC4-201ENST00000344722 ZFP64Q9NPA5 681 aa16.21■□□□□ 0.19
SMC4-201ENST00000344722 K7EQM0 130 aa16.21■□□□□ 0.18
SMC4-201ENST00000344722 MBPP02686 304 aaPredicted RBP16.21■□□□□ 0.18
SMC4-201ENST00000344722 CD38P28907 300 aa16.21■□□□□ 0.18
SMC4-201ENST00000344722 MRPS21P82921 87 aaKnown RBP16.21■□□□□ 0.18
SMC4-201ENST00000344722 NHLRC3Q5JS37 347 aa16.21■□□□□ 0.18
SMC4-201ENST00000344722 BET1LQ9NYM9 111 aa16.21■□□□□ 0.18
SMC4-201ENST00000344722 NAT8Q9UHE5 227 aa16.21■□□□□ 0.18
SMC4-201ENST00000344722 NEU3Q9UQ49 428 aa16.21■□□□□ 0.18
SMC4-201ENST00000344722 PMCHP20382 165 aa16.2■□□□□ 0.18
SMC4-201ENST00000344722 DLK1P80370 383 aa16.2■□□□□ 0.18
SMC4-201ENST00000344722 SLC26A10Q8NG04 563 aa16.2■□□□□ 0.18
SMC4-201ENST00000344722 RAB40CQ96S21 281 aa16.2■□□□□ 0.18
SMC4-201ENST00000344722 UBE2L5PA0A1B0GUS4 154 aa16.2■□□□□ 0.18
SMC4-201ENST00000344722 MAP1LC3B2A6NCE7 125 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms