RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 QDPRP09417 244 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 PI3P19957 117 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 PTGFRP43088 359 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 PJVKQ0ZLH3 352 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SURF2Q15527 256 aaPredicted RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 KISS1Q15726 138 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 FAM57BQ71RH2 274 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SLC16A14Q7RTX9 510 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 C1QL2Q7Z5L3 287 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 ZNF283Q8N7M2 679 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 FADS6Q8N9I5 356 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 OR5L2Q8NGL0 311 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 OR51F2Q8NH61 342 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SLC25A43Q8WUT9 341 aaPredicted RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 LYZL4Q96KX0 146 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 TM2D1Q9BX74 207 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SEC11CQ9BY50 192 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 TLNRD1Q9H1K6 362 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 ACKR4Q9NPB9 350 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 PRR13Q9NZ81 148 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 MYOTQ9UBF9 498 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 WDR87Q6ZQQ6 2873 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SPEGQ15772 3267 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ASCC3Q8N3C0 2202 aaKnown RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 A0A0U1RQV5 110 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 C5orf63A6NC05 138 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 AQP7P3A6NL99 342 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 H7C2Y5 167 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ZFAND5O76080 213 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 TIAF1O95411 115 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ONECUT2O95948 504 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 OPN1LWP04000 364 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 HPNP05981 417 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 PET100P0DJ07 73 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ZNF43P17038 809 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 KLK2P20151 261 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 THBS4P35443 961 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 OR3A2P47893 321 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 DHPSP49366 369 aaPredicted RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 ZNF133P52736 654 aaPredicted RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 SNU13P55769 128 aaKnown RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 LSM6P62312 80 aaKnown RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 RAB32Q13637 225 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ARFRP1Q13795 201 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 CARD17Q5XLA6 110 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ZNF385CQ66K41 422 aaPredicted RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 H3F3CQ6NXT2 135 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ZNF585AQ6P3V2 769 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ZNF574Q6ZN55 896 aaPredicted RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 FOXL2NBQ6ZUU3 175 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 PNLDC1Q8NA58 520 aaKnown RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 EMG1Q92979 244 aaKnown RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 CNTNAP3BQ96NU0 1288 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 OR5B2Q96R09 309 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 GPER1Q99527 375 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 ADAT1Q9BUB4 502 aaKnown RBP7.65□□□□□ -1.18
CLK1-201ENST00000321356 PECRQ9BY49 303 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 METTL7AQ9H8H3 244 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 UQCC1Q9NVA1 299 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 HDGFL3Q9Y3E1 203 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 V9GYS6 101 aa7.65□□□□□ -1.18
CLK1-201ENST00000321356 PRUNE2Q8WUY3 3088 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SERPINE3A8MV23 424 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 F8W036 122 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SDCBPO00560 298 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 TAAR5O14804 337 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 RRP8O43159 456 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 MBTPS2O43462 519 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 OR2J2O76002 312 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 HTR3BO95264 441 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 HEXAP06865 529 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 GLRA1P23415 457 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 FKBP2P26885 142 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 ADH6P28332 368 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 OTX1P32242 354 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 PTGER4P35408 488 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 CAV2P51636 162 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 CSNK2A1P68400 391 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 HIST1H3AP68431 136 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 BLOC1S1P78537 153 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 ARL6IP1Q15041 203 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 PPA1Q15181 289 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SMAD2Q15796 467 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 C10orf128Q5T292 105 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 HIST2H3PS2Q5TEC6 136 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 FAM69BQ5VUD6 431 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 TMEM88Q6PEY1 159 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 HAGHLQ6PII5 290 aaPredicted RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 HIST2H3AQ71DI3 136 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 CPEB2Q7Z5Q1 589 aaKnown RBP7.64□□□□□ -1.19
CLK1-201ENST00000321356 DTX1Q86Y01 620 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 CBLN2Q8IUK8 224 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 WDSUB1Q8N9V3 476 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 CSNK2A3Q8NEV1 391 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 OR51T1Q8NGJ9 327 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 DNASE2BQ8WZ79 361 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 NRIP2Q9BQI9 281 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 ST6GALNAC5Q9BVH7 336 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 SLC7A5P2Q9GIP4 190 aa7.64□□□□□ -1.19
CLK1-201ENST00000321356 EHFQ9NZC4 300 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms