RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MITD1Q8WV92 249 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 SDHAF3Q9NRP4 125 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 LIPT2A6NK58 231 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 SLC17A2O00624 439 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 ERCC1P07992 297 aaPredicted RBP13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 DAOP14920 347 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 AKR1C4P17516 323 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 HLA-GP17693 338 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 APOBEC1P41238 236 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 DAP3P51398 398 aaKnown RBP13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 OR52W1Q6IF63 320 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 FAM166AQ6J272 317 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 ST8SIA1Q92185 356 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 CYYR1Q96J86 154 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 SMCO4Q9NRQ5 59 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 LPAR3Q9UBY5 353 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 WIF1Q9Y5W5 379 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 WIPF3A6NGB9 483 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 A6NLC8 198 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 AGAP20933 346 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 ANOS1P23352 680 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 LPAR6P43657 344 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 CAV2P51636 162 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 SCAND1P57086 179 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 DHRS11Q6UWP2 260 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 CATSPERDQ86XM0 798 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 POC1BQ8TC44 478 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 PRR13Q9NZ81 148 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 HHLA2Q9UM44 414 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 ZNF432O94892 652 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 PRF1P14222 555 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 HTR2CP28335 458 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 CD80P33681 288 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 SERPINF1P36955 418 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 IL34Q6ZMJ4 242 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 CHST4Q8NCG5 386 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 OR13C9Q8NGT0 318 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 MFSD8Q8NHS3 518 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 AKR1E2Q96JD6 320 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 PTGES2Q9H7Z7 377 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 FN3KRPQ9HA64 309 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 ASH2LQ9UBL3 628 aa13.74□□□□□ -0.21
SHROOM1-201ENST00000319854 LY86O95711 162 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 RCC1P18754 421 aaPredicted RBP13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 RPS18P62269 152 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 PLPPR5Q32ZL2 321 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 CDNFQ49AH0 187 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 TEX30Q5JUR7 227 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 RTN4RL2Q86UN3 420 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 UEVLDQ8IX04 471 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 SLAMF6Q96DU3 332 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 KCNK17Q96T54 332 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 IGLV3-12A0A075B6K2 115 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 RER1O15258 196 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 GATCO43716 136 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 SSBP1Q04837 148 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 C15orf54Q8N8G6 183 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 ST7LQ8TDW4 575 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 NUDCD2Q8WVJ2 157 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 IP6K3Q96PC2 410 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 RPS10P5Q9NQ39 176 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 PLA2G2EQ9NZK7 142 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 PILRBQ9UKJ0 227 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 R4GMQ9 66 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 hCG_1809904A0A1W2PP81 198 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 A0A1W2PR64 198 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 A0A1W2PRV1 198 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 IL2RAP01589 272 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 IGHV2-5P01817 119 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 KLK3P07288 261 aaPredicted RBP13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 TRIM61Q5EBN2 209 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 OR2B11Q5JQS5 317 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 PMS2CLQ68D20 193 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 CDPF1Q6NVV7 123 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 DNM1P34Q6PK57 102 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 OR4D6Q8NGJ1 314 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 OR51E1Q8TCB6 317 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 NPRL2Q8WTW4 380 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 FAM71F1Q96KD3 344 aaPredicted RBP13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 PHB2Q99623 299 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 B3GAT1Q9P2W7 334 aa13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 METTL1Q9UBP6 276 aaKnown RBP13.73□□□□□ -0.21
SHROOM1-201ENST00000319854 MYO7BQ6PIF6 2116 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 EFSO43281 561 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 NME2P22392 152 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 ROM1Q03395 351 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 PMPCAQ10713 525 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 NCOA6Q14686 2063 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 RAET1LQ5VY80 246 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 ZNF585AQ6P3V2 769 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 KLHL24Q6TFL4 600 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 OIT3Q8WWZ8 545 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 SPACA9Q96E40 222 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 OR5AC2Q9NZP5 309 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 A6NIZ1 184 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 FAM157AC9JC47 383 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 SERPINA5P05154 406 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 FBP1P09467 338 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms