RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 PLATP00750 562 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 CCL3P10147 92 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 PRF1P14222 555 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 BLVRBP30043 206 aaPredicted RBP11.95□□□□□ -0.5
BCCIP-202ENST00000299130 CXCL12P48061 93 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 SNU13P55769 128 aaKnown RBP11.95□□□□□ -0.5
BCCIP-202ENST00000299130 PRSS12P56730 875 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 CSNK2A1P68400 391 aaPredicted RBP11.95□□□□□ -0.5
BCCIP-202ENST00000299130 SRSF3P84103 164 aaKnown RBP11.95□□□□□ -0.5
BCCIP-202ENST00000299130 PNLIPRP3Q17RR3 467 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 PEG10Q86TG7 708 aaKnown RBP11.95□□□□□ -0.5
BCCIP-202ENST00000299130 ARRDC1Q8N5I2 433 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 CSNK2A3Q8NEV1 391 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 OR51F2Q8NH61 342 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 SAP25Q8TEE9 199 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 SLC25A43Q8WUT9 341 aaPredicted RBP11.95□□□□□ -0.5
BCCIP-202ENST00000299130 PECRQ9BY49 303 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 MYO7BQ6PIF6 2116 aa11.95□□□□□ -0.5
BCCIP-202ENST00000299130 LOC102725191A0A1B0GVB3 256 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 FCGR2AP12318 317 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
BCCIP-202ENST00000299130 PNLIPP16233 465 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 MSR1P21757 451 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 CSNK1A1P48729 337 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 DRAM2Q6UX65 266 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 TMEM17Q86X19 198 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 PAQR8Q8TEZ7 354 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 MARC2Q969Z3 335 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 URM1Q9BTM9 101 aaKnown RBP11.94□□□□□ -0.5
BCCIP-202ENST00000299130 RBM24Q9BX46 236 aaKnown RBP11.94□□□□□ -0.5
BCCIP-202ENST00000299130 SLC26A1Q9H2B4 701 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 EHFQ9NZC4 300 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 ZNF581Q9P0T4 197 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 C19orf25Q9UFG5 118 aaPredicted RBP11.94□□□□□ -0.5
BCCIP-202ENST00000299130 PRELID1Q9Y255 219 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 A0A1B0GW55 424 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 MSTNO14793 375 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 FGF16O43320 207 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 DUX4L2P0CJ85 424 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 DUX4L3P0CJ86 424 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 DUX4L4P0CJ87 422 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 DUX4L5P0CJ88 424 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 DUX4L6P0CJ89 424 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 DUX4L7P0CJ90 424 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 NAT2P11245 290 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 CTRB1P17538 263 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 FPR2P25090 351 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 CTSSP25774 331 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 ADH6P28332 368 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 EIF1P41567 113 aaKnown RBP11.94□□□□□ -0.5
BCCIP-202ENST00000299130 ECH1Q13011 328 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 CTRB2Q6GPI1 263 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 TMEM54Q969K7 222 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 JSRP1Q96MG2 331 aaPredicted RBP11.94□□□□□ -0.5
BCCIP-202ENST00000299130 HDHD3Q9BSH5 251 aaPredicted RBP11.94□□□□□ -0.5
BCCIP-202ENST00000299130 DUX4Q9UBX2 424 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 PIGLQ9Y2B2 252 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 CACNA1EQ15878 2313 aa11.94□□□□□ -0.5
BCCIP-202ENST00000299130 ZIC3O60481 467 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 UMODP07911 640 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 ADCYAP1P18509 176 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 OR3A2P47893 321 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 LSM6P62312 80 aaKnown RBP11.93□□□□□ -0.5
BCCIP-202ENST00000299130 SNAI3Q3KNW1 292 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 ACTBL2Q562R1 376 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 C6orf201Q7Z4U5 140 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 GTPBP8Q8N3Z3 284 aaPredicted RBP11.93□□□□□ -0.5
BCCIP-202ENST00000299130 STOML3Q8TAV4 291 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 CDC6Q99741 560 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 NELFAQ9H3P2 528 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 ELL3Q9HB65 397 aaPredicted RBP11.93□□□□□ -0.5
BCCIP-202ENST00000299130 WNT16Q9UBV4 365 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 MCTS1Q9ULC4 181 aaKnown RBP11.93□□□□□ -0.5
BCCIP-202ENST00000299130 V9GYS6 101 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 PI4KAP42356 2102 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 TP53I11O14683 189 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 TLX3O43711 291 aaPredicted RBP11.93□□□□□ -0.5
BCCIP-202ENST00000299130 DHRS3O75911 302 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 ACTL6AO96019 429 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 RAB32Q13637 225 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 PLEKHN1Q494U1 663 aaPredicted RBP11.93□□□□□ -0.5
BCCIP-202ENST00000299130 RAET1LQ5VY80 246 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 TMEM123Q8N131 208 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 PNLDC1Q8NA58 520 aaKnown RBP11.93□□□□□ -0.5
BCCIP-202ENST00000299130 FBXO17Q96EF6 278 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 ADAT1Q9BUB4 502 aaKnown RBP11.93□□□□□ -0.5
BCCIP-202ENST00000299130 DUSP23Q9BVJ7 150 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 PIGMQ9H3S5 423 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 RAB18Q9NP72 206 aa11.93□□□□□ -0.5
BCCIP-202ENST00000299130 IGHV1-45A0A0A0MS14 117 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 PMS2P1A4D2B8 440 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 GPR31O00270 319 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 ABCD4O14678 606 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 KNG1P01042 644 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 HOXB5P09067 269 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 ICAM2P13598 275 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 HLA-BQ31612 363 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 C10orf128Q5T292 105 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms