RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CARTPTQ16568 116 aa12.41□□□□□ -0.42
C9orf3-202ENST00000297979 AWAT2Q6E213 333 aa12.41□□□□□ -0.42
C9orf3-202ENST00000297979 UTS2BQ765I0 119 aa12.41□□□□□ -0.42
C9orf3-202ENST00000297979 SEMA6DQ8NFY4 1073 aa12.41□□□□□ -0.42
C9orf3-202ENST00000297979 CAPSLQ8WWF8 208 aa12.41□□□□□ -0.42
C9orf3-202ENST00000297979 SPACA5Q96QH8 159 aa12.41□□□□□ -0.42
C9orf3-202ENST00000297979 RGCCQ9H4X1 137 aa12.41□□□□□ -0.42
C9orf3-202ENST00000297979 MYEF2Q9P2K5 600 aaKnown RBP12.41□□□□□ -0.42
C9orf3-202ENST00000297979 ASPMQ8IZT6 3477 aa12.41□□□□□ -0.42
C9orf3-202ENST00000297979 TRAV18A0A075B6X5 111 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 RNF224P0DH78 156 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 COX5BP10606 129 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 CD79AP11912 226 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 SDHBP21912 280 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 BTCP35070 178 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 ARR3P36575 388 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 PMPCAQ10713 525 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 AANATQ16613 207 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 RSBN1Q5VWQ0 802 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-202ENST00000297979 OR10K2Q6IF99 312 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 C11orf88Q6PI97 169 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 OR5M9Q8NGP3 310 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 RAB22AQ9UL26 194 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 A0A0A6YYH2 397 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 A6NJ64 397 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 BET1O15155 118 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 IL18BPO95998 194 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 PRF1P14222 555 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 EIF2S3P41091 472 aaKnown RBP12.4□□□□□ -0.42
C9orf3-202ENST00000297979 AP3S2P59780 193 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 AGAP6Q5VW22 663 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 DNM1P46Q6ZS02 220 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 ANGPTL5Q86XS5 388 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 OR1K1Q8NGR3 316 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 UPRTQ96BW1 309 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 B3GNT2Q9NY97 397 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 KLK11Q9UBX7 282 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 MRPS28Q9Y2Q9 187 aaKnown RBP12.4□□□□□ -0.42
C9orf3-202ENST00000297979 AKAP13Q12802 2813 aa12.4□□□□□ -0.42
C9orf3-202ENST00000297979 MED12LQ86YW9 2145 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 MEIOCA2RUB1 952 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 ZNF503-AS2A6NEH8 195 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 QRFPP83859 136 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 PLA1AQ53H76 456 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 RNF144BQ7Z419 303 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 DPPA2Q7Z7J5 298 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 SPACA3Q8IXA5 215 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 GCNT2Q8N0V5 402 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 RBMXL3Q8N7X1 1067 aaKnown RBP12.39□□□□□ -0.43
C9orf3-202ENST00000297979 CHAC2Q8WUX2 184 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 C1QTNF5Q9BXJ0 243 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 NPAP1Q9NZP6 1156 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 OR14I1A6ND48 311 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 MKRN2OSH3BPM6 223 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 VSIG8P0DPA2 414 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 ACKR3P25106 362 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 RIPPLY1Q0D2K3 151 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 UNC119Q13432 240 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 GUSBP1Q15486 140 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 UBE2V2Q15819 145 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 TFAP2EQ6VUC0 442 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 OR56B2PQ8NGI1 322 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 GPER1Q99527 375 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 DPAGT1Q9H3H5 408 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 FBLN5Q9UBX5 448 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 ZFHX4Q86UP3 3567 aa12.39□□□□□ -0.43
C9orf3-202ENST00000297979 LOC100509620A0A075B734 347 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 METTL21EPA6NDL7 271 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 K7EM74 188 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 XRCC2O43543 280 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 OR3A4PP47883 348 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 RAB1AP62820 205 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 SNTB2Q13425 540 aaKnown RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 GLIPR1L1Q6UWM5 242 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 PAQR4Q8N4S7 273 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 HPS1Q92902 700 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 WNT2BQ93097 391 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 CREB3L1Q96BA8 519 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 MARVELD1Q9BSK0 173 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 RIMS4Q9H426 269 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 ZFP57Q9NU63 452 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 RTTNQ86VV8 2226 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 AHRRA9YTQ3 701 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 SNAPINO95295 136 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 ACSF3Q4G176 576 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 RPUSD3Q6P087 351 aaKnown RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 ZNF101Q8IZC7 436 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 PNLDC1Q8NA58 520 aaKnown RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 NPRL2Q8WTW4 380 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 NANOS1Q8WY41 292 aaKnown RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 BCL2L2Q92843 193 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 MRPL15Q9P015 296 aaKnown RBP12.38□□□□□ -0.43
C9orf3-202ENST00000297979 MSRB2Q9Y3D2 182 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 A0A0B4J293 547 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 hCG_38984A0A1B0GV85 526 aa12.38□□□□□ -0.43
C9orf3-202ENST00000297979 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms