RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 CISD2Q8N5K1 135 aaKnown RBP10.57□□□□□ -0.72
SNIP1-201ENST00000296215 SPACA9Q96E40 222 aaPredicted RBP10.57□□□□□ -0.72
SNIP1-201ENST00000296215 SMG9Q9H0W8 520 aaKnown RBP10.57□□□□□ -0.72
SNIP1-201ENST00000296215 NEU3Q9UQ49 428 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 TET3O43151 1660 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 OR4C45A6NMZ5 311 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 PRR35P0CG20 571 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 FUT3P21217 361 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 DUSP1P28562 367 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 IL12BP29460 328 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 SCAND1P57086 179 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 DOC2BQ14184 412 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 ADGRE4PQ86SQ3 457 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 MS4A6EQ96DS6 147 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 NSG1A0A0A6YYJ2 146 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 A0A1B0GTL3 188 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 TEX50A0A1B0GTY4 177 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 TDGF1P13385 188 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 RBX1P62877 108 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 HBG1P69891 147 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 HBG2P69892 147 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 RNASEKQ6P5S7 137 aaKnown RBP10.57□□□□□ -0.72
SNIP1-201ENST00000296215 ATOH7Q8N100 152 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 D2HGDHQ8N465 521 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 MUCL1Q96DR8 90 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 CHST8Q9H2A9 424 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 MTCH1Q9NZJ7 389 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 MARCH2Q9P0N8 246 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 KIAA1210Q9ULL0 1709 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 FGF16O43320 207 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 NKX2-1P43699 371 aaPredicted RBP10.57□□□□□ -0.72
SNIP1-201ENST00000296215 PITX1P78337 314 aaPredicted RBP10.57□□□□□ -0.72
SNIP1-201ENST00000296215 SPNS2Q8IVW8 549 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 FAM169BQ8N8A8 192 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 PLPP7Q8NBV4 271 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 OR4K14Q8NGD5 310 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 SLC38A5Q8WUX1 472 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 NKX2-4Q9H2Z4 354 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 TMEM38AQ9H6F2 299 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
SNIP1-201ENST00000296215 A0A087WWC5 75 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 CCL25O15444 150 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 PLPP2O43688 288 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 RAMP1O60894 148 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 OR4Q2P0C623 313 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ALOX5APP20292 161 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 F2RP25116 425 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-201ENST00000296215 STAC2Q6ZMT1 411 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ZNF681Q96N22 645 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 TMEM106BQ9NUM4 274 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ELOVL2Q9NXB9 296 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 NEURL4Q96JN8 1562 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 SLC2A10O95528 541 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 CA1P00915 261 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-201ENST00000296215 BTCP35070 178 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ITPRIPL2Q3MIP1 535 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 AGTRAPQ6RW13 159 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 LAS2Q8IYD9 372 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 OR51T1Q8NGJ9 327 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 OR5B3Q8NH48 314 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ADGRL4Q9HBW9 690 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 OSER1Q9NX31 292 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 JKAMPQ9P055 326 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 IFITM10A6NMD0 228 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 TAPBPO15533 448 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 C1QL1O75973 258 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ADRA2CP18825 462 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 SRPXP78539 464 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 C19orf48Q6RUI8 117 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 HFE2Q6ZVN8 426 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 PRR22Q8IZ63 422 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ALG14Q96F25 216 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 FAM173AQ9BQD7 235 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 MESP1Q9BRJ9 268 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 NGBQ9NPG2 151 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ASIC5Q9NY37 505 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 SS18L2Q9UHA2 77 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 SOX21Q9Y651 276 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-201ENST00000296215 CCDC88AQ3V6T2 1871 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 MT-ATP6P00846 226 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 TIAL1Q01085 375 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNIP1-201ENST00000296215 GPR20Q99678 358 aa10.56□□□□□ -0.72
SNIP1-201ENST00000296215 ITSN1Q15811 1721 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
SNIP1-201ENST00000296215 CLEC18AA5D8T8 446 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 TMEM212A6NML5 194 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 NDUFB2O95178 105 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 ADH4P08319 380 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 NPBWR2P48146 333 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 GPM6AP51674 278 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 CRYBA4P53673 196 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 PLCXD3Q63HM9 321 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 TCTN3Q6NUS6 607 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 GKN2Q86XP6 184 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 CLEC18CQ8NCF0 446 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 OR4D5Q8NGN0 318 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 GPR150Q8NGU9 434 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 ELOVL5Q9NYP7 299 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms