RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PCOLCE2Q9UKZ9 415 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 ACACAQ13085 2346 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 HSPB2A8KAH6 182 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 NME1P15531 152 aaKnown RBP11.9□□□□□ -0.5
SCAF4-201ENST00000286835 RAB2AP61019 212 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 VAMP2P63027 116 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 GABREP78334 506 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 FZD2Q14332 565 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 HSPB2Q16082 182 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 MIDNQ504T8 468 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 BRICD5Q6PL45 260 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 DRAM2Q6UX65 266 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 GLYATL2Q8WU03 294 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 FSCN3Q9NQT6 498 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 FAM212BQ9NTI7 297 aaPredicted RBP11.9□□□□□ -0.5
SCAF4-201ENST00000286835 C1orf123Q9NWV4 160 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 SCRG1O75711 98 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 BPNT1O95861 308 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 NAT2P11245 290 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 PTAFRP25105 342 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 TMEM176BQ3YBM2 270 aaPredicted RBP11.9□□□□□ -0.5
SCAF4-201ENST00000286835 LRRC75AQ8NAA5 344 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 OR5L1Q8NGL2 311 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 WBP1Q96G27 269 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 LIN37Q96GY3 246 aaPredicted RBP11.9□□□□□ -0.5
SCAF4-201ENST00000286835 PFDN5Q99471 154 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 KLHL13Q9P2N7 655 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 PISDQ9UG56 409 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 IGHV1OR15-9A0A0B4J2B8 117 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 FRG2CA6NGY1 282 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 UMAD1C9J7I0 102 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
SCAF4-201ENST00000286835 IFNA2P01563 188 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 RSU1Q15404 277 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 OR2A2Q6IF42 318 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 LILRB1Q8NHL6 650 aaPredicted RBP11.9□□□□□ -0.5
SCAF4-201ENST00000286835 OR10C1Q96KK4 312 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 PLEK2Q9NYT0 353 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 FBXL17Q9UF56 701 aa11.9□□□□□ -0.5
SCAF4-201ENST00000286835 A0A1W2PPH5 198 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 EIF3GO75821 320 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCAF4-201ENST00000286835 SFT2D2O95562 160 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 HERV-K104P61576 105 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 GNMTQ14749 295 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 STX12Q86Y82 276 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 ZNF524Q96C55 264 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 SOX7Q9BT81 388 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 LUZP4Q9P127 313 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 WNT16Q9UBV4 365 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 PTRH2Q9Y3E5 179 aaKnown RBP11.89□□□□□ -0.51
SCAF4-201ENST00000286835 DNAH14Q0VDD8 3507 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 IGHG1P01857 330 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
SCAF4-201ENST00000286835 LTBRP36941 435 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 LPAR6P43657 344 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 PDCD1Q15116 288 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 TSC22D1Q15714 1073 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 FAM189A2Q15884 450 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 C20orf196Q8IYI0 205 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 WWTR1Q9GZV5 400 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 IGLV1-36A0A0B4J1U3 117 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 G3V3Y1 287 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 ANGPTL7O43827 346 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 TXNDC12O95881 172 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 ZNF735P0CB33 412 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 CCNOP22674 350 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 NDUFA6P56556 154 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 TAS2R46P59540 309 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 TAF9Q16594 264 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 NCMAPQ5T1S8 102 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 FBXW12Q6X9E4 464 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
SCAF4-201ENST00000286835 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 DTWD2Q8NBA8 298 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 REEP6Q96HR9 211 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 SEC11CQ9BY50 192 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 SMOC1Q9H4F8 434 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 MMP24Q9Y5R2 645 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 C1QL1O75973 258 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 LINC00271P0C7V0 271 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 FAHP16930 419 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 CAPZBP47756 277 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 FOXF1Q12946 379 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 UNC119Q13432 240 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 HNF4GQ14541 408 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 TSPO2Q5TGU0 170 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 SUMF2Q8NBJ7 301 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 OR8U1Q8NH10 309 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 GPBAR1Q8TDU6 330 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 RAB33BQ9H082 229 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 ESRP2Q9H6T0 727 aaKnown RBP11.89□□□□□ -0.51
SCAF4-201ENST00000286835 RBM7Q9Y580 266 aaKnown RBP11.89□□□□□ -0.51
SCAF4-201ENST00000286835 PCDHGA1Q9Y5H4 931 aa11.89□□□□□ -0.51
SCAF4-201ENST00000286835 WISP1O95388 367 aa11.88□□□□□ -0.51
SCAF4-201ENST00000286835 CER1O95813 267 aa11.88□□□□□ -0.51
SCAF4-201ENST00000286835 ADCYAP1P18509 176 aa11.88□□□□□ -0.51
SCAF4-201ENST00000286835 MECP2P51608 486 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms