RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SMIM8Q96KF7 97 aa11.67□□□□□ -0.54
SLC28A1-201ENST00000286749 PNRC2Q9NPJ4 139 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-201ENST00000286749 E9PLN8 166 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 TRAF3IP2O43734 574 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 DUX1O43812 170 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 MED6O75586 246 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 KNG1P01042 644 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 PET100P0DJ07 73 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 SPP1P10451 314 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 CBX5P45973 191 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 CAV2P51636 162 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 HNRNPKP61978 463 aaKnown RBP eCLIP11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 ANKRD37Q7Z713 158 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 RXFP4Q8TDU9 374 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 C2CD4CQ8TF44 421 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 ZNF775Q96BV0 537 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 SAT2Q96F10 170 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 LIN37Q96GY3 246 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 C12orf57Q99622 126 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 TRBV11-1A0A0K0K1C0 115 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 PMS2P1A4D2B8 440 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 AGPAT2O15120 278 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 SERPINA5P05154 406 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 HPNP05981 417 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 TAS2R46P59540 309 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 CTAG1AP78358 180 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 IL15RAQ13261 267 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 SMAD4Q13485 552 aaKnown RBP11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 PLPPR5Q32ZL2 321 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 SLC25A47Q6Q0C1 308 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 DOK3Q7L591 496 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 GALNTL5Q7Z4T8 443 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 NFAM1Q8NET5 270 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 OR5B2Q96R09 309 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 CMSS1Q9BQ75 279 aaKnown RBP11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 TAF9BQ9HBM6 251 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 BIN3Q9NQY0 253 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 SDHAF3Q9NRP4 125 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 DNAJB11Q9UBS4 358 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 WIF1Q9Y5W5 379 aa11.66□□□□□ -0.54
SLC28A1-201ENST00000286749 METTL12A8MUP2 240 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 RAMP1O60894 148 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 CRYBA1P05813 215 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 SFTA3P0C7M3 94 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 CCL1P22362 96 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 BLVRBP30043 206 aaPredicted RBP11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 OR2A2Q6IF42 318 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 SYT13Q7L8C5 426 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 ZFP82Q8N141 532 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 SSC4DQ8WTU2 575 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 MRGPRX4Q96LA9 322 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 NECAB3Q96P71 396 aaPredicted RBP11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 RNASEK-C17orf49H0YIS7 233 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 QDPRP09417 244 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 HKR1P10072 659 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 KLK2P20151 261 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 PTGER4P35408 488 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 KISS1Q15726 138 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 AVPI1Q5T686 147 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 FAM89BQ8N5H3 189 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 GLYATL2Q8WU03 294 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 PECRQ9BY49 303 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 SLC7A5P2Q9GIP4 190 aa11.65□□□□□ -0.54
SLC28A1-201ENST00000286749 EML6Q6ZMW3 1958 aa11.65□□□□□ -0.55
SLC28A1-201ENST00000286749 MEX3AA1L020 520 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 ETV2O00321 342 aaPredicted RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 FBXO24O75426 580 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 HEXBP07686 556 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 SERPINA2P20848 420 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 PTGFRP43088 359 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 KCNJ3P48549 501 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 FAM189A2Q15884 450 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 CHRFAM7AQ494W8 412 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 CRIP3Q6Q6R5 217 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 PNLDC1Q8NA58 520 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 OR14K1Q8NGZ2 314 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 EMG1Q92979 244 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 ZNF701Q9NV72 531 aaPredicted RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 COA4Q9NYJ1 87 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 ASCC3Q8N3C0 2202 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 CABIN1Q9Y6J0 2220 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 FIGNL2A6NMB9 653 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 STMND1H3BQB6 276 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 MTRF1O75570 445 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 ZNF708P17019 499 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 SFTPDP35247 375 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 ID4P47928 161 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 CSNK1EP49674 416 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 ACY1Q03154 408 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 IAH1Q2TAA2 248 aaPredicted RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 FAM69BQ5VUD6 431 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 EIF5AL1Q6IS14 154 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 CARFQ8N187 725 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 SMRP1Q8NCR6 262 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 OR10G3Q8NGC4 313 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 PGAM5Q96HS1 289 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 METTL7AQ9H8H3 244 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 C14orf166Q9Y224 244 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 MEMO1Q9Y316 297 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms