RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 VEGFCP49767 419 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 ZNF585AQ6P3V2 769 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 OR2W3Q7Z3T1 314 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 C1QL2Q7Z5L3 287 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 CCDC54Q8NEL0 328 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 PP6455Q8WZ26 134 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 GPER1Q99527 375 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 SCPEP1Q9HB40 452 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 GPR173Q9NS66 373 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 PRSS50Q9UI38 385 aa18.2■□□□□ 0.5
YBX3-202ENST00000279550 PEX14O75381 377 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 MTRF1O75570 445 aaKnown RBP18.19■□□□□ 0.5
YBX3-202ENST00000279550 CD3DP04234 171 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 AGTR1P30556 359 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 KISS1Q15726 138 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 PRR30Q53SZ7 412 aaPredicted RBP18.19■□□□□ 0.5
YBX3-202ENST00000279550 TCTE3Q8IZS6 198 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 GABRG1Q8N1C3 465 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 OR5D18Q8NGL1 313 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 PIGTQ969N2 578 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 ZNF486Q96H40 463 aaPredicted RBP18.19■□□□□ 0.5
YBX3-202ENST00000279550 GMPPAQ96IJ6 420 aaPredicted RBP18.19■□□□□ 0.5
YBX3-202ENST00000279550 MED28Q9H204 178 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 BANF2Q9H503 90 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 GLRX2Q9NS18 164 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 ASF1BQ9NVP2 202 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 TAS2R8Q9NYW2 309 aa18.19■□□□□ 0.5
YBX3-202ENST00000279550 OR6C65A6NJZ3 312 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 CDC14BO60729 498 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 NDUFB6O95139 128 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 MPIG6BO95866 241 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 HLA-HP01893 362 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 HPXP02790 462 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 TPOP07202 933 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 AKAIN1P0CW23 69 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 SFTPCP11686 197 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 SSBP1Q04837 148 aaKnown RBP18.18■□□□□ 0.5
YBX3-202ENST00000279550 FAPQ12884 760 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 CDNFQ49AH0 187 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 RAB12Q6IQ22 244 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 Q6ZTK2 550 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 ZNF100Q8IYN0 542 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 CHST4Q8NCG5 386 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 SEMA6DQ8NFY4 1073 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 OR11H7Q8NGC8 314 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 OR8S1Q8NH09 359 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 WNT2BQ93097 391 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 ACTR6Q9GZN1 396 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 UPB1Q9UBR1 384 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 SS18L1O75177 396 aaPredicted RBP18.18■□□□□ 0.5
YBX3-202ENST00000279550 ALX3O95076 343 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 EDN3P14138 238 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 RAD52P43351 418 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 SF3B4Q15427 424 aaKnown RBP eCLIP18.18■□□□□ 0.53e-8■■■■■ 36.3
YBX3-202ENST00000279550 NSUN5P2Q63ZY6 315 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 CD163Q86VB7 1156 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 FJX1Q86VR8 437 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 C12orf49Q9H741 205 aa18.18■□□□□ 0.5
YBX3-202ENST00000279550 LOC100509620A0A075B734 347 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 FIGNL2A6NMB9 653 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 SMLR1H3BR10 107 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 WDR1O75083 606 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 STOMP27105 288 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 FAUP35544 74 aaKnown RBP18.17■□□□□ 0.5
YBX3-202ENST00000279550 ACTBP60709 375 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 ACTG1P63261 375 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 STEAP1BQ6NZ63 245 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 ZNF782Q6ZMW2 699 aaPredicted RBP18.17■□□□□ 0.5
YBX3-202ENST00000279550 GCNT2Q8N0V5 402 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 TMEM229BQ8NBD8 167 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 OR10R2Q8NGX6 335 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 FAM57AQ8TBR7 257 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 C10orf35Q96D05 121 aa18.17■□□□□ 0.5
YBX3-202ENST00000279550 ARHGAP21Q5T5U3 1957 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 ERVH48-1M5A8F1 160 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 ICMTO60725 284 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 NAT2P11245 290 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 GNB3P16520 340 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 PTGFRP43088 359 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 ZNF92Q03936 586 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 NOXA1Q86UR1 476 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 C9orf106Q8NAJ2 232 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 KCNG3Q8TAE7 436 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 NUDCD2Q8WVJ2 157 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 DEDD2Q8WXF8 326 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 SEC22CQ9BRL7 303 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 SELENOIQ9C0D9 397 aa18.16■□□□□ 0.5
YBX3-202ENST00000279550 hCG_38984A0A1B0GV85 526 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 DHRS7CA6NNS2 312 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 M0QYG6 137 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 SOCS1O15524 211 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 CRTAPO75718 401 aaPredicted RBP18.15■□□□□ 0.5
YBX3-202ENST00000279550 MELTFP08582 738 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 ANXA7P20073 488 aaKnown RBP18.15■□□□□ 0.5
YBX3-202ENST00000279550 PTGER4P35408 488 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 GSK3AP49840 483 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 RIPPLY1Q0D2K3 151 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 GUSBP1Q15486 140 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 SLC22A6Q4U2R8 563 aa18.15■□□□□ 0.5
YBX3-202ENST00000279550 TRAPPC6BQ86SZ2 158 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms