RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 PMPCAQ10713 525 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 OPCMLQ14982 345 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 AWAT2Q6E213 333 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF100Q8IYN0 542 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 AKR7LQ8NHP1 331 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 SGK3Q96BR1 496 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 DHRS9Q9BPW9 319 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 WNT5BQ9H1J7 359 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 SCPEP1Q9HB40 452 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 SPRR3Q9UBC9 169 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 KCNMB2Q9Y691 235 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 DNAJC13O75165 2243 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 PYCARD-AS1I3L0S3 204 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 LCATP04180 440 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 PATE4P0C8F1 98 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 UBBP0CG47 229 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 RRASP10301 218 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 GSK3AP49840 483 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 ARF1P84077 181 aaKnown RBP13.36□□□□□ -0.27
SF3B4-201ENST00000271628 C3AR1Q16581 482 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 SNAI3Q3KNW1 292 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 PLXDC2Q6UX71 529 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 IDO2Q6ZQW0 420 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 SLC36A1Q7Z2H8 476 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 PNLDC1Q8NA58 520 aaKnown RBP13.36□□□□□ -0.27
SF3B4-201ENST00000271628 SEMA6DQ8NFY4 1073 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 CHST5Q9GZS9 411 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 RGCCQ9H4X1 137 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 CA10Q9NS85 328 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 GHRLQ9UBU3 117 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 PIGLQ9Y2B2 252 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 ASPMQ8IZT6 3477 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 SLC22A20A6NK97 555 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 RGS11O94810 467 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 CFDP00746 253 aaPredicted RBP13.35□□□□□ -0.27
SF3B4-201ENST00000271628 AKAIN1P0CW23 69 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 VSIG8P0DPA2 414 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 PRF1P14222 555 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 ACTBP60709 375 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 ACTG1P63261 375 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 QRFPP83859 136 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 OR2W3Q7Z3T1 314 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 COMMD7Q86VX2 200 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 PAQR4Q8N4S7 273 aaPredicted RBP13.35□□□□□ -0.27
SF3B4-201ENST00000271628 OR4C16Q8NGL9 310 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 SSC4DQ8WTU2 575 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 FAM46BQ96A09 425 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 GPER1Q99527 375 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 NUDT16L1Q9BRJ7 211 aaKnown RBP13.35□□□□□ -0.27
SF3B4-201ENST00000271628 GINS4Q9BRT9 223 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 KIF25Q9UIL4 384 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 MRPS28Q9Y2Q9 187 aaKnown RBP13.35□□□□□ -0.27
SF3B4-201ENST00000271628 C5orf63A6NC05 138 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 HMSDA8MTL9 139 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 L7N2F9 121 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 SFRP5Q5T4F7 317 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 OR10K2Q6IF99 312 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 ASCL5Q7RTU5 278 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF101Q8IZC7 436 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 KCNG3Q8TAE7 436 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 FGFBP3Q8TAT2 258 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 GPX8Q8TED1 209 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 ASB13Q8WXK3 278 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 REEP6Q96HR9 211 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 PRDM14Q9GZV8 571 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 GLRX2Q9NS18 164 aa13.35□□□□□ -0.27
SF3B4-201ENST00000271628 MYEF2Q9P2K5 600 aaKnown RBP13.35□□□□□ -0.27
SF3B4-201ENST00000271628 IGKV1-9A0A0C4DH69 117 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 ZSCAN5BA6NJL1 495 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 TMEM14DPA8MWL7 114 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 B8ZZF3 427 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 MCRIP1C9JLW8 97 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 I3L521 148 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 LPLP06858 475 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 CHRM2P08172 466 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 COX5BP10606 129 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 PMP22Q01453 160 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 KISS1Q15726 138 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 PABPC1L2AQ5JQF8 200 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 GLIPR1L1Q6UWM5 242 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 C3P1Q6ZMU1 363 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 RIF1Q5UIP0 2472 aaKnown RBP13.34□□□□□ -0.27
SF3B4-201ENST00000271628 ZFHX4Q86UP3 3567 aa13.34□□□□□ -0.27
SF3B4-201ENST00000271628 FAHP16930 419 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 CXCL2P19875 107 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 ALDH3B1P43353 468 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 UNC119Q13432 240 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 UBE2V2Q15819 145 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 NHLRC3Q5JS37 347 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 NUFIP2Q7Z417 695 aaKnown RBP13.33□□□□□ -0.27
SF3B4-201ENST00000271628 ZADH2Q8N4Q0 377 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 ELMOD3Q96FG2 381 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 CPNE2Q96FN4 548 aaPredicted RBP13.33□□□□□ -0.27
SF3B4-201ENST00000271628 GMPPAQ96IJ6 420 aaPredicted RBP13.33□□□□□ -0.27
SF3B4-201ENST00000271628 SPACA5Q96QH8 159 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 ALX4Q9H161 411 aaPredicted RBP13.33□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF224Q9NZL3 707 aa13.33□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF107Q9UII5 783 aaPredicted RBP13.33□□□□□ -0.27
SF3B4-201ENST00000271628 RAB27BO00194 218 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms