RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TIMD4Q96H15 378 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 PARP12Q9H0J9 701 aaKnown RBP12.49□□□□□ -0.41
CDH3-201ENST00000264012 OR5V1Q9UGF6 321 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 SCN3AQ9NY46 2000 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 OR2M5A3KFT3 312 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 DHRS3O75911 302 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 OR8U8P0C7N1 319 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 B3GNTL1Q67FW5 361 aaPredicted RBP12.49□□□□□ -0.41
CDH3-201ENST00000264012 CATSPERDQ86XM0 798 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 GCNT2Q8N0V5 402 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 TMED6Q8WW62 240 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 TCFL5Q9UL49 500 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 SCN10AQ9Y5Y9 1956 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 LRP3O75074 770 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 JTBO76095 146 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 FUT3P21217 361 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 P2RX3P56373 397 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 TESK1Q15569 626 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 NANPQ8TBE9 248 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 SFT2D1Q8WV19 159 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 MRM2Q9UI43 246 aaKnown RBP12.49□□□□□ -0.41
CDH3-201ENST00000264012 IGHV5-10-1A0A0J9YXX1 117 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 M0R296 226 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 TAAR5O14804 337 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 HES1Q14469 280 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 MESTQ5EB52 335 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 C1orf87Q8N0U7 546 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 GALNT16Q8N428 558 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 PTP4A1Q93096 173 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 SKP2Q13309 424 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 SNTB1Q13884 538 aaKnown RBP12.48□□□□□ -0.41
CDH3-201ENST00000264012 PXDC1Q5TGL8 231 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 DMKNQ6E0U4 476 aaPredicted RBP12.48□□□□□ -0.41
CDH3-201ENST00000264012 RGS7BPQ6MZT1 257 aaPredicted RBP12.48□□□□□ -0.41
CDH3-201ENST00000264012 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
CDH3-201ENST00000264012 NPEPL1Q8NDH3 523 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 M1APQ8TC57 530 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 ST8SIA4Q92187 359 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 PIGMQ9H3S5 423 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 ZNF391Q9UJN7 358 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 ICAM5Q9UMF0 924 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 FCARP24071 287 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 DBPQ10586 325 aaPredicted RBP12.48□□□□□ -0.41
CDH3-201ENST00000264012 PABPC1L2AQ5JQF8 200 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
CDH3-201ENST00000264012 ARV1Q9H2C2 271 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 ZNF355PQ9NSJ1 428 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 PARP14Q460N5 1801 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 TMEM272A0A1B0GTI8 110 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 ERGP11308 486 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 SSX9Q7RTT3 188 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 OR2W3Q7Z3T1 314 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 OR6X1Q8NH79 312 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 EXTL1Q92935 676 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 ZNF275Q9NSD4 429 aaPredicted RBP12.48□□□□□ -0.41
CDH3-201ENST00000264012 DTX4Q9Y2E6 619 aa12.48□□□□□ -0.41
CDH3-201ENST00000264012 H3BMH7 237 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 RPL12P30050 165 aaKnown RBP12.47□□□□□ -0.41
CDH3-201ENST00000264012 RAC3P60763 192 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 GNG3P63215 75 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 SMIM21Q3B7S5 101 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 TSEN54Q7Z6J9 526 aaKnown RBP12.47□□□□□ -0.41
CDH3-201ENST00000264012 SLC22A18ASQ8N1D0 253 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 C2orf50Q96LR7 162 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 ZDBF2Q9HCK1 2354 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 AKR7A2O43488 359 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 SPANXN5Q5MJ07 72 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 HIST2H3PS2Q5TEC6 136 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 ZNF626Q68DY1 528 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 C17orf107Q6ZR85 190 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 CDH26Q8IXH8 852 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 PPP1R1CQ8WVI7 109 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 NIPSNAP3BQ9BS92 247 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 LIN7CQ9NUP9 197 aaKnown RBP12.47□□□□□ -0.41
CDH3-201ENST00000264012 NDRG3Q9UGV2 375 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 OR5H15A6NDH6 313 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 LIPT2A6NK58 231 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 ZNF891A8MT65 544 aaPredicted RBP12.47□□□□□ -0.41
CDH3-201ENST00000264012 HLA-HP01893 362 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 WNT1P04628 370 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 PTGFRP43088 359 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 ELLP55199 621 aaPredicted RBP12.47□□□□□ -0.41
CDH3-201ENST00000264012 TMEM128Q5BJH2 165 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 AVPI1Q5T686 147 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 KCNIP4Q6PIL6 250 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 ADGRG3Q86Y34 549 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 FAM185AQ8N0U4 392 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 WDR89Q96FK6 387 aaPredicted RBP12.47□□□□□ -0.41
CDH3-201ENST00000264012 SHARPINQ9H0F6 387 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 MTFP1Q9UDX5 166 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 RPH3ALQ9UNE2 315 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 RAB19A4D1S5 217 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 HPP00738 406 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 SPINK14Q6IE38 97 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 GFRALQ6UXV0 394 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 ASB10Q8WXI3 467 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 CMBLQ96DG6 245 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms