RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 BCL6P41182 706 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR3A1P47881 315 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 FAHD2BQ6P2I3 314 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 ZNF687Q8N1G0 1237 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR11H7Q8NGC8 314 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR4A4PQ8NGN8 299 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR51E1Q8TCB6 317 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 FAHD2AQ96GK7 314 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 SPTA1P02549 2419 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 ANKRD20A5PA0PJZ0 165 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 CER1O95813 267 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 TMEM33P57088 247 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 PFN3P60673 137 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 FAM3AP98173 230 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 AAED1Q7RTV5 226 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR5C1Q8NGR4 320 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 NXPE3Q969Y0 559 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 RHOVQ96L33 236 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR6C3Q9NZP0 311 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 AMDHD2Q9Y303 409 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 DEGS1O15121 323 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 PLA2G10O15496 165 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 MRPL33O75394 65 aaKnown RBP11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 GLB1P16278 677 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 NKG7Q16617 165 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 HNRNPA1L2Q32P51 320 aaKnown RBP11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 MAML2Q8IZL2 1156 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR2C3Q8N628 320 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 PHOSPHO2Q8TCD6 241 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 TMPRSS13Q9BYE2 586 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 SMDT1Q9H4I9 107 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 GDE1Q9NZC3 331 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 B3GAT1Q9P2W7 334 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 C5orf52A6NGY3 159 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 PLPP2O43688 288 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 SLC37A1P57057 533 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 TIAL1Q01085 375 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 RPEL1Q2QD12 228 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 USP53Q70EK8 1073 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 TPSD1Q9BZJ3 242 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 TAAR2Q9P1P5 351 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 UBE2L5PA0A1B0GUS4 154 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 PAFAH1B2P68402 229 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 PUSL1Q8N0Z8 303 aaKnown RBP11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR52N4Q8NGI2 321 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 LRRC3BQ96PB8 259 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 ANGPTL4Q9BY76 406 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 LIPGQ9Y5X9 500 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 KNTC1P50748 2209 aa11.88□□□□□ -0.51
PCDHGA3-201ENST00000253812 FBLL1A6NHQ2 334 aaKnown RBP11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 H3BQ15 152 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 HCRTR1O43613 425 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 RHBDL1O75783 438 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 PIAS2O75928 621 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 GPANK1O95872 356 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 CRHP06850 196 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 IRS1P35568 1242 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 C1orf140Q5VVS0 124 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 ARIH2OSQ8N7S6 290 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 ERGIC1Q969X5 290 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 DDA1Q9BW61 102 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 PARP11Q9NR21 331 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 LAMB1P07942 1786 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 C4orf47A7E2U8 309 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 SPINK4O60575 86 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 FAM74A3Q4VXF1 159 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 ZNF343Q6P1L6 599 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 H1FNTQ75WM6 255 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 CDC20BQ86Y33 519 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 CISD2Q8N5K1 135 aaKnown RBP11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 ATOH1Q92858 354 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 ORAI1Q96D31 301 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 FBXO17Q96EF6 278 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 NRIP2Q9BQI9 281 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 FTSJ1Q9UET6 329 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 PISDQ9UG56 409 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 R4GMQ9 66 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 DIRC3C9JPN6 131 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 IGF2P01344 180 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 SLC35E2P0CK97 266 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 BMP5P22003 454 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 GJA4P35212 333 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 IFITM2Q01629 132 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 C17orf67Q0P5P2 114 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 CAMKMTQ7Z624 323 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 MARCH3Q86UD3 253 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 SLAMF6Q96DU3 332 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 WDR61Q9GZS3 305 aaKnown RBP11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 LPAR5Q9H1C0 372 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 C7orf66A4D0T2 115 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 CTDSPLO15194 276 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 ST8SIA5O15466 376 aa11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 EIF1BO60739 113 aaKnown RBP11.87□□□□□ -0.51
PCDHGA3-201ENST00000253812 CSNK1G2P78368 415 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms