RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ITGB1BP2Q9UKP3 347 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 DNAJC13O75165 2243 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 hCG_38984A0A1B0GV85 526 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 DISC1C4P0D8 188 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 RGS13O14921 159 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 FCER2P06734 321 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 HIST1H1DP16402 221 aaKnown RBP20.24■□□□□ 0.83
MSX2-201ENST00000239243 CXCL3P19876 107 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 TBPP20226 339 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 GNG2P59768 71 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 ZMYND11Q15326 602 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 C9orf135Q5VTT2 229 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 ZNF626Q68DY1 528 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 NUFIP2Q7Z417 695 aaKnown RBP20.24■□□□□ 0.83
MSX2-201ENST00000239243 OR5D18Q8NGL1 313 aa20.24■□□□□ 0.83
MSX2-201ENST00000239243 A0A096LPE4 126 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 A0A1W2PPZ6 126 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 FABP7O15540 132 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 RLN1P04808 185 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 AGTR1P30556 359 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 IFITM2Q01629 132 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 CLN3Q13286 438 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 ARL6IP1Q15041 203 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 RNASE10Q5GAN6 216 aaKnown RBP20.23■□□□□ 0.83
MSX2-201ENST00000239243 ZBTB37Q5TC79 503 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 TMEM42Q69YG0 159 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 FAM89BQ8N5H3 189 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 SPSB4Q96A44 273 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 PLEKHA6Q9Y2H5 1048 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 A0A0A6YYD4 124 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 UBE2QL1A1L167 161 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 MTCP1P56278 107 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 FAM3AP98173 230 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 OR8B8Q15620 311 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 TMEM53Q6P2H8 277 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 IDO2Q6ZQW0 420 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 COLCA1Q6ZS62 124 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 LHFPL2Q6ZUX7 228 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 NCCRP1Q6ZVX7 275 aaPredicted RBP20.23■□□□□ 0.83
MSX2-201ENST00000239243 BPIFB2Q8N4F0 458 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 NUDCD2Q8WVJ2 157 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 SEC22CQ9BRL7 303 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 TINAGL1Q9GZM7 467 aaPredicted RBP20.23■□□□□ 0.83
MSX2-201ENST00000239243 GLRX2Q9NS18 164 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 ZNF69Q9UC07 566 aa20.23■□□□□ 0.83
MSX2-201ENST00000239243 MGMTP16455 207 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 PMP22Q01453 160 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 RSPO4Q2I0M5 234 aaPredicted RBP20.22■□□□□ 0.83
MSX2-201ENST00000239243 OR51T1Q8NGJ9 327 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 CCDC107Q8WV48 283 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 PRRT1Q99946 306 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 ALX4Q9H161 411 aaPredicted RBP20.22■□□□□ 0.83
MSX2-201ENST00000239243 SLC2A8Q9NY64 477 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 B3GNT2Q9NY97 397 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 NPTNQ9Y639 398 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 A0A1W2PP11 408 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 M0QYG6 137 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 SOCS1O15524 211 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 ATP6V1G1O75348 118 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 NRASP01111 189 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 MPZP25189 248 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 ZNF92Q03936 586 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 DEFB109BQ30KR1 87 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 SLC36A1Q7Z2H8 476 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 SPICQ8N5J4 248 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 MS4A3Q96HJ5 214 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 TM2D1Q9BX74 207 aa20.22■□□□□ 0.83
MSX2-201ENST00000239243 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.22■□□□□ 0.83
MSX2-201ENST00000239243 HLA-HP01893 362 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 CPT2P23786 658 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 MPGP29372 298 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 RBP2P50120 134 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 DMRTC1Q5HYR2 192 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 FBXW9Q5XUX1 488 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 P4HA3Q7Z4N8 544 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 C1QL2Q7Z5L3 287 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 BORCS8Q96FH0 119 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 GMPPAQ96IJ6 420 aaPredicted RBP20.21■□□□□ 0.83
MSX2-201ENST00000239243 ZNF436Q9C0F3 470 aaPredicted RBP20.21■□□□□ 0.83
MSX2-201ENST00000239243 ZNF735P0CB33 412 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 SERPINA2P20848 420 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 CBX5P45973 191 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 PLP2Q04941 152 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 PLAC9Q5JTB6 97 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 SEZ6L2Q6UXD5 910 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 SLC7A11Q9UPY5 501 aa20.21■□□□□ 0.83
MSX2-201ENST00000239243 ZNF816-ZNF321PA0A0X1KG74 233 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 SMLR1H3BR10 107 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 MFNGO00587 321 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 CEACAM4O75871 244 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 CD79AP11912 226 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 EDN3P14138 238 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 FOXG1P55316 489 aaPredicted RBP20.2■□□□□ 0.82
MSX2-201ENST00000239243 ZP1P60852 638 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 CAMK2BQ13554 666 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 OR4S1Q8NGB4 309 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 TMEM246Q9BRR3 403 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 LRFN3Q9BTN0 628 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 SLA2Q9H6Q3 261 aa20.2■□□□□ 0.82
MSX2-201ENST00000239243 ELL3Q9HB65 397 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms