RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SPAG16Q8N0X2 631 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 EMG1Q92979 244 aaKnown RBP11.71□□□□□ -0.53
SRP54-201ENST00000216774 ST6GALNAC5Q9BVH7 336 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 METTL8Q9H825 291 aaKnown RBP11.71□□□□□ -0.53
SRP54-201ENST00000216774 MEMO1Q9Y316 297 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 A0A0U1RQV5 110 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 MSGN1A6NI15 193 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 F8W036 122 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 TAAR5O14804 337 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 OPN1LWP04000 364 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 PI3P19957 117 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 ANOS1P23352 680 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 ECI1P42126 302 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 DHPSP49366 369 aaPredicted RBP11.71□□□□□ -0.54
SRP54-201ENST00000216774 AKR1C2P52895 323 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 CSNK2A1P68400 391 aaPredicted RBP11.71□□□□□ -0.54
SRP54-201ENST00000216774 SLC35A1P78382 337 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 BLOC1S1P78537 153 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 AKR1C1Q04828 323 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 GUCA2BQ16661 112 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 EIF5AL1Q6IS14 154 aaKnown RBP11.71□□□□□ -0.54
SRP54-201ENST00000216774 HAGHLQ6PII5 290 aaPredicted RBP11.71□□□□□ -0.54
SRP54-201ENST00000216774 SLC16A14Q7RTX9 510 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 LDLRAD3Q86YD5 345 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 CSNK2A3Q8NEV1 391 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 ADAMTS17Q8TE56 1095 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 SLC5A7Q9GZV3 580 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 EHFQ9NZC4 300 aa11.71□□□□□ -0.54
SRP54-201ENST00000216774 KLF2Q9Y5W3 355 aaPredicted RBP11.71□□□□□ -0.54
SRP54-201ENST00000216774 LAMA1P25391 3075 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 ZNF705EA8MWA4 302 aaPredicted RBP11.7□□□□□ -0.54
SRP54-201ENST00000216774 SNAPINO95295 136 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 PJVKQ0ZLH3 352 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 HFEQ30201 348 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 DHRS7BQ6IAN0 325 aaPredicted RBP11.7□□□□□ -0.54
SRP54-201ENST00000216774 FADS6Q8N9I5 356 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 OR4A4PQ8NGN8 299 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 PP6455Q8WZ26 134 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 DNASE2BQ8WZ79 361 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 SPACA9Q96E40 222 aaPredicted RBP11.7□□□□□ -0.54
SRP54-201ENST00000216774 PGAM5Q96HS1 289 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 TM2D1Q9BX74 207 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 SEC11CQ9BY50 192 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 CA14Q9ULX7 337 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 SPAG17Q6Q759 2223 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 ASXL3Q9C0F0 2248 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 CEP290O15078 2479 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 BCAT2O15382 392 aaPredicted RBP11.7□□□□□ -0.54
SRP54-201ENST00000216774 RAMP1O60894 148 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 SCRG1O75711 98 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 DKK1O94907 266 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 TIAF1O95411 115 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 ONECUT2O95948 504 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 HPNP05981 417 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 ZNF84P51523 738 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 SMAD2Q15796 467 aaKnown RBP11.7□□□□□ -0.54
SRP54-201ENST00000216774 MST1LQ2TV78 715 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 TMEM176BQ3YBM2 270 aaPredicted RBP11.7□□□□□ -0.54
SRP54-201ENST00000216774 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 ZNF574Q6ZN55 896 aaPredicted RBP11.7□□□□□ -0.54
SRP54-201ENST00000216774 BHLHE23Q8NDY6 225 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 CCDC54Q8NEL0 328 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 SMIM8Q96KF7 97 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 LYZL4Q96KX0 146 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 NECAB3Q96P71 396 aaPredicted RBP11.7□□□□□ -0.54
SRP54-201ENST00000216774 OR6C1Q96RD1 312 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 PECRQ9BY49 303 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 ZNF175Q9Y473 711 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 MTCH2Q9Y6C9 303 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 V9GYS6 101 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 UNC13CQ8NB66 2214 aa11.7□□□□□ -0.54
SRP54-201ENST00000216774 MBTPS2O43462 519 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 DHRS3O75911 302 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 HTR3BO95264 441 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 MSR1P21757 451 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 GLRA1P23415 457 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 CPT2P23786 658 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 BLVRBP30043 206 aaPredicted RBP11.69□□□□□ -0.54
SRP54-201ENST00000216774 SFTPDP35247 375 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 GUCA1AP43080 201 aaPredicted RBP11.69□□□□□ -0.54
SRP54-201ENST00000216774 RAB32Q13637 225 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 CHRFAM7AQ494W8 412 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 H3F3CQ6NXT2 135 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 Q6ZSR3 168 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 WDSUB1Q8N9V3 476 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 GJC3Q8NFK1 279 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 C10orf35Q96D05 121 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 ZNF160Q9HCG1 818 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 UQCC1Q9NVA1 299 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 PRR13Q9NZ81 148 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 C19orf25Q9UFG5 118 aaPredicted RBP11.69□□□□□ -0.54
SRP54-201ENST00000216774 C14orf166Q9Y224 244 aaKnown RBP11.69□□□□□ -0.54
SRP54-201ENST00000216774 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 E9PLN8 166 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 SDCBPO00560 298 aaPredicted RBP11.69□□□□□ -0.54
SRP54-201ENST00000216774 RRP8O43159 456 aaKnown RBP11.69□□□□□ -0.54
SRP54-201ENST00000216774 IFNA2P01563 188 aa11.69□□□□□ -0.54
SRP54-201ENST00000216774 SRSF3P84103 164 aaKnown RBP11.69□□□□□ -0.54
SRP54-201ENST00000216774 C10orf128Q5T292 105 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms