RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SCP2D1Q9UJQ7 156 aa25.85■■□□□ 1.73
PABPN1-201ENST00000216727 A0A1W2PP11 408 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 AMY2AP04746 511 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 HIST1H1DP16402 221 aaKnown RBP25.84■■□□□ 1.73
PABPN1-201ENST00000216727 MPZP25189 248 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 CCL11P51671 97 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 PLAC9Q5JTB6 97 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 FDCSPQ8NFU4 85 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 OR5D18Q8NGL1 313 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 C1QTNF5Q9BXJ0 243 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 SPRR3Q9UBC9 169 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 ZNF69Q9UC07 566 aa25.84■■□□□ 1.73
PABPN1-201ENST00000216727 SOCS1O15524 211 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 RLN1P04808 185 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 Q5BKY6 102 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 TMEM42Q69YG0 159 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 IDO2Q6ZQW0 420 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 PIGTQ969N2 578 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 DLL4Q9NR61 685 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 FAM86C1Q9NVL1 165 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 SLC2A8Q9NY64 477 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 B3GNT2Q9NY97 397 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 WT1P19544 449 aaPredicted RBP25.83■■□□□ 1.73
PABPN1-201ENST00000216727 TMEM50BP56557 158 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 PNLIPRP3Q17RR3 467 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 LAMTOR1Q6IAA8 161 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 BPIFB2Q8N4F0 458 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 OR4S1Q8NGB4 309 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 CPNE2Q96FN4 548 aaPredicted RBP25.83■■□□□ 1.73
PABPN1-201ENST00000216727 GP6Q9HCN6 339 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 GPR173Q9NS66 373 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 CSAG2Q9Y5P2 127 aa25.83■■□□□ 1.73
PABPN1-201ENST00000216727 FREM1Q5H8C1 2179 aa25.83■■□□□ 1.72
PABPN1-201ENST00000216727 hCG_38984A0A1B0GV85 526 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 XRCC2O43543 280 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 SSX5O60225 188 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 TBPP20226 339 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 PRKACBP22694 351 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 NBL1P41271 181 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 CNN3Q15417 329 aaKnown RBP25.82■■□□□ 1.72
PABPN1-201ENST00000216727 COLCA1Q6ZS62 124 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 STEAP2Q8NFT2 490 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 SPSB4Q96A44 273 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 S100A13Q99584 98 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 GON7Q9BXV9 100 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 KCNK7Q9Y2U2 307 aa25.82■■□□□ 1.72
PABPN1-201ENST00000216727 DISC1C4P0D8 188 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 COX5BP10606 129 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 CEACAM1P13688 526 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 FAM3AP98173 230 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 ZMYND11Q15326 602 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 NUFIP2Q7Z417 695 aaKnown RBP25.81■■□□□ 1.72
PABPN1-201ENST00000216727 PRRX2Q99811 253 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 IFT46Q9NQC8 304 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 ANAPC10Q9UM13 185 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 GNG2P59768 71 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 OR8B8Q15620 311 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 RNASE10Q5GAN6 216 aaKnown RBP25.81■■□□□ 1.72
PABPN1-201ENST00000216727 CLVS2Q5SYC1 327 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 GVQW1Q8N7I0 195 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 PRRT1Q99946 306 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 TM2D1Q9BX74 207 aa25.81■■□□□ 1.72
PABPN1-201ENST00000216727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP25.81■■□□□ 1.72
PABPN1-201ENST00000216727 UBE2QL1A1L167 161 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 OR14I1A6ND48 311 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 FOXI3A8MTJ6 420 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-201ENST00000216727 MFNGO00587 321 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 MGMTP16455 207 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 FOXG1P55316 489 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-201ENST00000216727 ZNF92Q03936 586 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 C9orf135Q5VTT2 229 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 MYO7BQ6PIF6 2116 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 SLC6A7Q99884 636 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 MYOZ1Q9NP98 299 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-201ENST00000216727 ZNF175Q9Y473 711 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 CNOT1A5YKK6 2376 aaKnown RBP25.8■■□□□ 1.72
PABPN1-201ENST00000216727 A0A096LPE4 126 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 A0A1W2PPZ6 126 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 EDN3P14138 238 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 MTCP1P56278 107 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 C9orf62Q8N4C0 152 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 OR51T1Q8NGJ9 327 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 PLEKHA6Q9Y2H5 1048 aa25.8■■□□□ 1.72
PABPN1-201ENST00000216727 RTN4RL2Q86UN3 420 aa25.79■■□□□ 1.72
PABPN1-201ENST00000216727 CCDC107Q8WV48 283 aa25.79■■□□□ 1.72
PABPN1-201ENST00000216727 MGAT4CQ9UBM8 478 aa25.79■■□□□ 1.72
PABPN1-201ENST00000216727 ZNF292O60281 2723 aa25.79■■□□□ 1.72
PABPN1-201ENST00000216727 SLC22A20A6NK97 555 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 NAT1P18440 290 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 NDUFA5Q16718 116 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 NLRC3Q7RTR2 1065 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 ARHGAP5-AS1Q96IT6 56 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 HSPB11Q9Y547 144 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 TMEM82A0PJX8 343 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 TM4SF5O14894 197 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 IGHG3P01860 377 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 HLA-HP01893 362 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 OR52B4Q8NGK2 314 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 OR13C8Q8NGS7 320 aa25.78■■□□□ 1.72
PABPN1-201ENST00000216727 MGAT4AQ9UM21 535 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms