RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CD83Q01151 205 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 PLP2Q04941 152 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 MAB21L1Q13394 359 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 METTL11BQ5VVY1 283 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 FAAP20Q6NZ36 180 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 TFAP2EQ6VUC0 442 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF782Q6ZMW2 699 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 LHFPL2Q6ZUX7 228 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 FAM214BQ7L5A3 538 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 C1QL2Q7Z5L3 287 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 FJX1Q86VR8 437 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 CCDC36Q8IYA8 594 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 CMBLQ96DG6 245 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 BOD1Q96IK1 185 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 FYTTD1Q96QD9 318 aaKnown RBP12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 REPIN1Q9BWE0 567 aaKnown RBP12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 SELENOIQ9C0D9 397 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 OR10A4Q9H209 315 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 OPA3Q9H6K4 179 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
RTFDC1-201ENST00000023939 AHRRA9YTQ3 701 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF736B4DX44 427 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 ARPC1BO15143 372 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 CA11O75493 328 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 CRTAPO75718 401 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 RAB3DO95716 219 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 NRASP01111 189 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 CD79AP11912 226 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 HIST1H1DP16402 221 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 TBPP20226 339 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 MTCP1P56278 107 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 MEF2DQ14814 521 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 ARL6IP1Q15041 203 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 FCN2Q15485 313 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 ST3GAL2Q16842 350 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 SLC22A6Q4U2R8 563 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 RPUSD3Q6P087 351 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 ZNF584Q8IVC4 421 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 OR4D10Q8NGI6 311 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 NPRL2Q8WTW4 380 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 PIGTQ969N2 578 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 RAB3CQ96E17 227 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 TAAR6Q96RI8 345 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 NICN1Q9BSH3 213 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 ZMAT3Q9HA38 289 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 ELF5Q9UKW6 265 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 ING4Q9UNL4 249 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 FLVCR2Q9UPI3 526 aa12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 RIF1Q5UIP0 2472 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-201ENST00000023939 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 SNRPGP15A8MWD9 76 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 MFNGO00587 321 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 MGMTP16455 207 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 NAT1P18440 290 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 RBP2P50120 134 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 FUT6P51993 359 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 TMEM50BP56557 158 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 NHLH1Q02575 133 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 ZMYND11Q15326 602 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 PLAC9Q5JTB6 97 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 GLDNQ6ZMI3 551 aaPredicted RBP12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 TRAPPC6BQ86SZ2 158 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 NOXA1Q86UR1 476 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 OR51S1Q8NGJ8 323 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 ZNF486Q96H40 463 aaPredicted RBP12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 ZNF75AQ96N20 296 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 TRIB1Q96RU8 372 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 S100A13Q99584 98 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 SLC25A21Q9BQT8 299 aaPredicted RBP12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 BANF2Q9H503 90 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 SLC2A8Q9NY64 477 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 KCNN3Q9UGI6 736 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 POU2F3Q9UKI9 436 aa12.4□□□□□ -0.43
RTFDC1-201ENST00000023939 GVINP1Q7Z2Y8 2422 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 FREM1Q5H8C1 2179 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 A0A1W2PP11 408 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 C5orf49A4QMS7 147 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 J3QW42 95 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 SOCS1O15524 211 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 SSX5O60225 188 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 WISP2O76076 250 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 C1QBP02746 253 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 ZNF735P0CB33 412 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 SULT1A3P0DMM9 295 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 SULT1A4P0DMN0 295 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 GNB3P16520 340 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 TGFBR3Q03167 851 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 MALLQ13021 153 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 CBX3Q13185 183 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 OR2A2Q6IF42 318 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 SEZ6L2Q6UXD5 910 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 OR5D18Q8NGL1 313 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 BORCS8Q96FH0 119 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 DMRTB1Q96MA1 342 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 GINS4Q9BRT9 223 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms