RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ZNF695Q8IW36 515 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SAXO1Q8IYX7 474 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 PGAM4Q8N0Y7 254 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 KIR2DL5AQ8N109 375 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 KRT222Q8N1A0 295 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 TMEM86AQ8N2M4 240 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 OR2L13Q8N349 312 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 KIF2BQ8N4N8 673 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 MREGQ8N565 214 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 RNF182Q8N6D2 247 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SYT14Q8NB59 555 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 LINC00301Q8NCQ3 95 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 CATSPER1Q8NEC5 780 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 OR10G2Q8NGC3 310 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 OR4D5Q8NGN0 318 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 OR10G9Q8NGN4 311 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 OR2G2Q8NGZ5 317 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 CXorf40AQ8TE69 158 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 ZFP90Q8TF47 636 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 C2orf15Q8WU43 125 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM172AQ8WUF8 416 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 GIMAP1Q8WWP7 306 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 ITLN2Q8WWU7 325 aaPredicted RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 NELFBQ8WX92 580 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 GEMIN6Q8WXD5 167 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 FRZBQ92765 325 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 OSTF1Q92882 214 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 UFD1Q92890 307 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 TSLPQ969D9 159 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SYAP1Q96A49 352 aaPredicted RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM131CQ96AQ9 280 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 EXOSC8Q96B26 276 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 TBC1D31Q96DN5 1066 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 ASB9Q96DX5 294 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 PELI1Q96FA3 418 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF578Q96N58 590 aaPredicted RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 TSNARE1Q96NA8 513 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SERPINB11Q96P15 392 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 NPY6RQ99463 290 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 GPA33Q99795 319 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 NIPSNAP3BQ9BS92 247 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 NUP58Q9BVL2 599 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 RIOK2Q9BVS4 552 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 RSPO3Q9BXY4 272 aaPredicted RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 GPR61Q9BZJ8 451 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 UCK2Q9BZX2 261 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 ILKAPQ9H0C8 392 aaPredicted RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 OR2AG1Q9H205 316 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SPNS1Q9H2V7 528 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SRMSQ9H3Y6 488 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 CHMP4BQ9H444 224 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 DHX35Q9H5Z1 703 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 ASB7Q9H672 318 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 LIN28AQ9H9Z2 209 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SGK2Q9HBY8 427 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 CSNK1G1Q9HCP0 422 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 MRPL47Q9HD33 250 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM60AQ9NP50 221 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 RAB18Q9NP72 206 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 NT5MQ9NPB1 228 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 DYRK4Q9NR20 520 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 CCL28Q9NRJ3 127 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 INPP5EQ9NRR6 644 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC35D1Q9NTN3 355 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 HPF1Q9NWY4 346 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 GIN1Q9NXP7 522 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC39A1Q9NY26 324 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SMPD3Q9NY59 655 aaPredicted RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SIGLEC8Q9NYZ4 499 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC23A2Q9UGH3 650 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF222Q9UK12 451 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 PTBP2Q9UKA9 531 aaKnown RBP0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 KIAA1257Q9ULG3 409 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 KCNIP3Q9Y2W7 256 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 ASB3Q9Y575 518 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 OR51B4Q9Y5P0 310 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 FADS3Q9Y5Q0 445 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 JMJD1CQ15652 2540 aa0.66□□□□□ -2.3
SMARCB1-209ENST00000635578 SORL1Q92673 2214 aa0.65□□□□□ -2.3
SMARCB1-209ENST00000635578 PRKDCP78527 4128 aaKnown RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 IGLV2-18A0A075B6J9 118 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PPIAL4EA0A075B759 164 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 C1orf232A0A0U1RR37 186 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TSPAN11A1L157 253 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PCP4L1A6NKN8 68 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR5B21A6NL26 309 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 C12orf77C9JDV5 145 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 F8VZ95 297 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 INS-IGF2F8WCM5 200 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 MKRN2OSH3BPM6 223 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 K7EPI3 171 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 K7EQM0 130 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 KCNK1O00180 336 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 DYNC1I1O14576 645 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC31A2O15432 143 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TAPBPO15533 448 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CALUO43852 315 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 MGRN1O60291 552 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NIPSNAP2O75323 286 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 RDH16O75452 317 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms