RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 ADAT1Q9BUB4 502 aaKnown RBP16.42■□□□□ 0.22
CROCCP4-202ENST00000633627 TMUB1Q9BVT8 246 aa16.42■□□□□ 0.22
CROCCP4-202ENST00000633627 PPP1R3EQ9H7J1 279 aa16.42■□□□□ 0.22
CROCCP4-202ENST00000633627 CHODLQ9H9P2 273 aa16.42■□□□□ 0.22
CROCCP4-202ENST00000633627 PAK1IP1Q9NWT1 392 aaPredicted RBP16.42■□□□□ 0.22
CROCCP4-202ENST00000633627 CACNG2Q9Y698 323 aa16.42■□□□□ 0.22
CROCCP4-202ENST00000633627 V9GYS6 101 aa16.42■□□□□ 0.22
CROCCP4-202ENST00000633627 A0A096LNT2 108 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 OR4C45A6NMZ5 311 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 DENRO43583 198 aaKnown RBP16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 PTBP3O95758 552 aaKnown RBP16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 SLC25A16P16260 332 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 TNFRSF1AP19438 455 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 TGM4P49221 684 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 SRP9P49458 86 aaKnown RBP16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 TMEM33P57088 247 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 SLC35A2P78381 396 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 MED21Q13503 144 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 ALKBH1Q13686 389 aaKnown RBP16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 ZBTB37Q5TC79 503 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 TMPRSS11AQ6ZMR5 421 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 DOK3Q7L591 496 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 COMMD2Q86X83 199 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 STX19Q8N4C7 294 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 KLHL36Q8N4N3 616 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 CELF2-AS1Q8N7Q2 184 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 SPERTQ8NA61 448 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 SEMA6DQ8NFY4 1073 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 OR52N1Q8NH53 320 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 HAVCR2Q8TDQ0 301 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 SGCDQ92629 289 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 DVL3Q92997 716 aaPredicted RBP16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 DUSP21Q9H596 190 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 ZNF275Q9NSD4 429 aaPredicted RBP16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 SCN3BQ9NY72 215 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 MPC1Q9Y5U8 109 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 CSPG4Q6UVK1 2322 aa16.41■□□□□ 0.22
CROCCP4-202ENST00000633627 ZANQ9Y493 2812 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 DHRS7CA6NNS2 312 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 PTGES3LE9PB15 166 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 MTRF1O75570 445 aaKnown RBP16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 ISG15P05161 165 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 CDK1P06493 297 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 UBCP0CG48 685 aaKnown RBP16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 NR4A2P43354 598 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 GATA4P43694 442 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 GBX2P52951 348 aaPredicted RBP16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 RIPPLY1Q0D2K3 151 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 ODF4Q2M2E3 257 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 RNLSQ5VYX0 342 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 RDH10Q8IZV5 341 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 CIARTQ8N365 385 aaPredicted RBP16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 FTMTQ8N4E7 242 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 PIMREGQ9BSJ6 248 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 PAPOLGQ9BWT3 736 aaKnown RBP16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 REG4Q9BYZ8 158 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 GCM1Q9NP62 436 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 CHCHD3Q9NX63 227 aaKnown RBP16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 UBAP1Q9NZ09 502 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 TPRKBQ9Y3C4 175 aa16.4■□□□□ 0.22
CROCCP4-202ENST00000633627 ZNF816-ZNF321PA0A0X1KG74 233 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 LOC100289279A0A1B0GTE1 492 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 A0A1B0GVI7 797 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 RNF223E7ERA6 249 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 H7C1Q1 480 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 FAHP16930 419 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 CRHBPP24387 322 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 GTF2A1P52655 376 aaPredicted RBP16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 HFEQ30201 348 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 TMEM244Q5VVB8 128 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 XAF1Q6GPH4 301 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 CCDC54Q8NEL0 328 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 RPS4Y2Q8TD47 263 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 ITPKCQ96DU7 683 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 COX4I2Q96KJ9 171 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 BPESC1Q9GZL8 116 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 DCAF16Q9NXF7 216 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 BABAM2Q9NXR7 383 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 PPP1R3CQ9UQK1 317 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 PIGLQ9Y2B2 252 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 CR1P17927 2039 aa16.39■□□□□ 0.21
CROCCP4-202ENST00000633627 LOC107986453A0A1B0GWG9 222 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 ZNF850A8MQ14 1090 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 SYT7O43581 403 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 LALBAP00709 142 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 GNALP38405 381 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 PMELP40967 661 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 HNRNPA0Q13151 305 aaKnown RBP16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 PRDX4Q13162 271 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 CCDC58Q4VC31 144 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 TMEM42Q69YG0 159 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 NANOGP1Q8N7R0 232 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 PIGCQ92535 297 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 CCL17Q92583 94 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 MYDGFQ969H8 173 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 CDCA4Q9BXL8 241 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 FGF23Q9GZV9 251 aaPredicted RBP16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 Q9H521 79 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 ABCB9Q9NP78 766 aa16.38■□□□□ 0.21
CROCCP4-202ENST00000633627 TREM2Q9NZC2 230 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms