RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 ZNF816Q0VGE8 651 aaPredicted RBP11.5□□□□□ -0.57
SCN8A-209ENST00000627620 FAM122CQ6P4D5 195 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 BTNL8Q6UX41 500 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 OR5B3Q8NH48 314 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 AQP7P3A6NL99 342 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 MBP02144 154 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 COX5AP20674 150 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 MPLP40238 635 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 BAK1Q16611 211 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 TIGITQ495A1 244 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 DTWD2Q8NBA8 298 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 SMIM4Q8WVI0 70 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 IGHV1OR21-1A0A087WYE8 117 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 SLC25A6P12236 298 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 RPUSD3Q6P087 351 aaKnown RBP11.5□□□□□ -0.57
SCN8A-209ENST00000627620 ADPRHL1Q8NDY3 354 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 OR4S1Q8NGB4 309 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 OR52B4Q8NGK2 314 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 ERGIC1Q969X5 290 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 RPUSD4Q96CM3 377 aaKnown RBP11.5□□□□□ -0.57
SCN8A-209ENST00000627620 CTGFP29279 349 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 SPEM2Q0P670 501 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 RAB35Q15286 201 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 PRSS41Q7RTY9 318 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 SLC38A6Q8IZM9 456 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 SLC39A7Q92504 469 aa11.5□□□□□ -0.57
SCN8A-209ENST00000627620 CHEK1O14757 476 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 SEMG1P04279 462 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 WNT3P56703 355 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 FMODQ06828 376 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 EIF3IQ13347 325 aaKnown RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TMEM92Q6UXU6 159 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 ANKRD37Q7Z713 158 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TMEM229BQ8NBD8 167 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 RELL2Q8NC24 303 aaPredicted RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 GPBAR1Q8TDU6 330 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 EXTL1Q92935 676 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 PELI1Q96FA3 418 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 SRRQ9GZT4 340 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 BARX1Q9HBU1 254 aaPredicted RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 YBX2Q9Y2T7 364 aaKnown RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 ICMTO60725 284 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TMEM127O75204 238 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TGM1P22735 817 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 PXDC1Q5TGL8 231 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TIGD3Q6B0B8 471 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 CXorf67Q86X51 503 aaPredicted RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 C20orf141Q9NUB4 165 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 KNL1Q8NG31 2342 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TBX19O60806 448 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 SLC25A1P53007 311 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 BAP18Q8IXM2 172 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 FBXL14Q8N1E6 418 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 SIRT5Q9NXA8 310 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 DNAJB12Q9NXW2 375 aaKnown RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 KCNE1BA0A087WTH5 132 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 AQP8O94778 261 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TXNDC12O95881 172 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 FUT3P21217 361 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 PAX6P26367 422 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 MMP15P51511 669 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 PRICKLE4Q2TBC4 344 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 FOXB2Q5VYV0 432 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 C17orf107Q6ZR85 190 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 BHLHA9Q7RTU4 235 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 OR2Z1Q8NG97 314 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TMEM230Q96A57 120 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 ADAT1Q9BUB4 502 aaKnown RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 WBP1LQ9NX94 342 aa11.49□□□□□ -0.57
SCN8A-209ENST00000627620 TMEFF2Q9UIK5 374 aaPredicted RBP11.49□□□□□ -0.57
SCN8A-209ENST00000627620 PPP1R1CQ8WVI7 109 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 TRMT61AQ96FX7 289 aaKnown RBP11.48□□□□□ -0.57
SCN8A-209ENST00000627620 OR2A5Q96R48 311 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 NDFIP1Q9BT67 221 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 AKIP1Q9NQ31 210 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 RCL1Q9Y2P8 373 aaKnown RBP11.48□□□□□ -0.57
SCN8A-209ENST00000627620 ADAM10O14672 748 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 TNFRSF1AP19438 455 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 COL9A1P20849 921 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 MEOX1P50221 254 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 PRDX4Q13162 271 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 KIAA0040Q15053 153 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 LINC00303Q3SY05 128 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 OR52N4Q8NGI2 321 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 SERTM2A0A1B0GWG4 89 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 TMEM30CPA0ZSE6 113 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 CLEC18AA5D8T8 446 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 NDUFB3O43676 98 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 HTRA4P83105 476 aaPredicted RBP11.48□□□□□ -0.57
SCN8A-209ENST00000627620 CDK5Q00535 292 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 CDC20Q12834 499 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 PLAC9Q5JTB6 97 aa11.48□□□□□ -0.57
SCN8A-209ENST00000627620 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.48□□□□□ -0.57
SCN8A-209ENST00000627620 KIAA1958Q8N8K9 716 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms